| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1842 |
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| Symbol | |
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| ID | 3909001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2108319 |
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| End bp | 2109188 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637883736 |
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| Product | putative periplasmic ligand-binding sensor protein |
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| Protein accession | YP_485461 |
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| Protein GI | 86748965 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00269543 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCTGA GGGAGACCAT CATGACACCG CAAGAGCGCC AGCTTGTGGA CGATCTGTTC
GAAAGGCTCG CCCGCCTCGA ATCCGCGCCG CGCGATCCGG ACGCAGCCGC GGCGATCGCC
CAGGGCCAGC GGATTGCGCC CAACGCGATC TATGGGCTGG TGCAGACCGT GCTGGTGCAG
GACGAGGCGC TGAAGCGCGC TCACGACCGC ATCCAGGAAC TGGAAGGCCA GAACGAAACC
GAGGCCCATC GCGGCGGCGG CTTCCTCGAC ACGATGCGGG ATACGATCTT CGGCCAAAGC
CAGCCGCAGC AGCGCAGTTC GGTCCCGAAC GTGCCGCCTC CCGGCACTGG CGGCGGCCGG
CCGGCCTGGA ATACCGGGCA GGTGCTGGGT CAGCAGCAGA TGGGGCAACC TTCCCCCGGC
CAATACGCGC CGCAGCAGGG CGGCGGATTC GGTGGTCCGT TCGGTGGCGG CGCGCCTTCT
CCGGCCGGCG GTGGCGGTGG ATCGTTCCTC GGCACCGCGG CGGCGGCGGC AGCGGGCGTG
GTCGGCGGCT CGCTGCTGCT GTCGAGCATC CGCGGCATGA TGGGCGGCGG CAGCGGCCAG
CAGAGCATGG CCGATCAGTC CGGCCTCGGC GGCGGCACCC AGAGCCCGTG GGGCGGCGAG
TCCTCGGGCG GCAACCTCGC GCAACAGGCC GGCCTGGGCG ACATCGGCTC ACAGCGCGGC
GGCGTCGACG ACGGCGGTTC GTCGCGCCAG AGCGCGATGG ATCCGGGATC GAACGGCGAT
CGCGATCAGG TCGCGGACGC CGGCTACGAC CAGGACGACA TGGATCTGGA TTCGGATTTC
GACGGCGGCG GCGACAGCGA CTTCGCCTGA
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| Protein sequence | MILRETIMTP QERQLVDDLF ERLARLESAP RDPDAAAAIA QGQRIAPNAI YGLVQTVLVQ
DEALKRAHDR IQELEGQNET EAHRGGGFLD TMRDTIFGQS QPQQRSSVPN VPPPGTGGGR
PAWNTGQVLG QQQMGQPSPG QYAPQQGGGF GGPFGGGAPS PAGGGGGSFL GTAAAAAAGV
VGGSLLLSSI RGMMGGGSGQ QSMADQSGLG GGTQSPWGGE SSGGNLAQQA GLGDIGSQRG
GVDDGGSSRQ SAMDPGSNGD RDQVADAGYD QDDMDLDSDF DGGGDSDFA
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