Gene RPB_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1841 
Symbol 
ID3909000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2107453 
End bp2108244 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID637883735 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_485460 
Protein GI86748964 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00844535 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAGGA AAACCACCCT CGCTTTGCTG ACAAGTGTGT CCTGTGTTGC CGCCGGACTG 
CCGCAGGCGG CGGCCTACGA GACCCCGCCC GCCCCCGAGC CCGCGGTGAT CTACGGAGCC
CGCCAGGCGC CGCAGCCCGT GCCGGTCCGC ACCGTTTCGG CCCAGCGCTC CAACATGGGC
GGCGGCTTCA TCGAGTTCCT GTTCAGCGAC GGCGGCGAGC GGCCCAACTC GGGTTACTAC
GAGCAGCCGT CCGACGATCA GCAGCGGCGC TATCTGCCGC CGATGGATCC GCAGGCGCCG
ATGCAGATGC GCCAGCAGGA GGCGATCGAT CCGGCGCGGC CGGCGTTCGA TCCGCGTTAC
GAAAAGCAGA TCGTCGATTA CCAGGGCAAC GAGAAGCCGG GTACCATCGT GGTCGATACG
CCGAACAAGT TTCTCTATCT GGTGCAGGGC GACGGCCGCG CGCTGCGCTA CGGCATCGGC
GTCGGCCGGC CGGGCTTCAC CTGGTCGGGC GTCAAGACCA TCTCCGCCAA GCGCGAGTGG
CCGTCCTGGA CGCCGCCGAA GGAAATGCTG GCACGGCGCC CCGACCTGCC GCGCTTCATG
GAGGGCGGCC CCGAGAATCC GCTCGGCGCC CGCGCGATGT ATCTTGGCTC GTCGCTGTAT
CGCATCCACG GCTCCAACGA GCCGTGGACG ATCGGCACCA ACGTCTCGTC CGGCTGCATC
CGGATGCGCA ACGAGGACGT CATCGACCTC TACGGTCGCG TCAATGTCGG CGCGCGGGTG
GTGGTGATCT GA
 
Protein sequence
MFRKTTLALL TSVSCVAAGL PQAAAYETPP APEPAVIYGA RQAPQPVPVR TVSAQRSNMG 
GGFIEFLFSD GGERPNSGYY EQPSDDQQRR YLPPMDPQAP MQMRQQEAID PARPAFDPRY
EKQIVDYQGN EKPGTIVVDT PNKFLYLVQG DGRALRYGIG VGRPGFTWSG VKTISAKREW
PSWTPPKEML ARRPDLPRFM EGGPENPLGA RAMYLGSSLY RIHGSNEPWT IGTNVSSGCI
RMRNEDVIDL YGRVNVGARV VVI