Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1841 |
Symbol | |
ID | 3909000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2107453 |
End bp | 2108244 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883735 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_485460 |
Protein GI | 86748964 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00844535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTCAGGA AAACCACCCT CGCTTTGCTG ACAAGTGTGT CCTGTGTTGC CGCCGGACTG CCGCAGGCGG CGGCCTACGA GACCCCGCCC GCCCCCGAGC CCGCGGTGAT CTACGGAGCC CGCCAGGCGC CGCAGCCCGT GCCGGTCCGC ACCGTTTCGG CCCAGCGCTC CAACATGGGC GGCGGCTTCA TCGAGTTCCT GTTCAGCGAC GGCGGCGAGC GGCCCAACTC GGGTTACTAC GAGCAGCCGT CCGACGATCA GCAGCGGCGC TATCTGCCGC CGATGGATCC GCAGGCGCCG ATGCAGATGC GCCAGCAGGA GGCGATCGAT CCGGCGCGGC CGGCGTTCGA TCCGCGTTAC GAAAAGCAGA TCGTCGATTA CCAGGGCAAC GAGAAGCCGG GTACCATCGT GGTCGATACG CCGAACAAGT TTCTCTATCT GGTGCAGGGC GACGGCCGCG CGCTGCGCTA CGGCATCGGC GTCGGCCGGC CGGGCTTCAC CTGGTCGGGC GTCAAGACCA TCTCCGCCAA GCGCGAGTGG CCGTCCTGGA CGCCGCCGAA GGAAATGCTG GCACGGCGCC CCGACCTGCC GCGCTTCATG GAGGGCGGCC CCGAGAATCC GCTCGGCGCC CGCGCGATGT ATCTTGGCTC GTCGCTGTAT CGCATCCACG GCTCCAACGA GCCGTGGACG ATCGGCACCA ACGTCTCGTC CGGCTGCATC CGGATGCGCA ACGAGGACGT CATCGACCTC TACGGTCGCG TCAATGTCGG CGCGCGGGTG GTGGTGATCT GA
|
Protein sequence | MFRKTTLALL TSVSCVAAGL PQAAAYETPP APEPAVIYGA RQAPQPVPVR TVSAQRSNMG GGFIEFLFSD GGERPNSGYY EQPSDDQQRR YLPPMDPQAP MQMRQQEAID PARPAFDPRY EKQIVDYQGN EKPGTIVVDT PNKFLYLVQG DGRALRYGIG VGRPGFTWSG VKTISAKREW PSWTPPKEML ARRPDLPRFM EGGPENPLGA RAMYLGSSLY RIHGSNEPWT IGTNVSSGCI RMRNEDVIDL YGRVNVGARV VVI
|
| |