| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1820 |
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| Symbol | |
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| ID | 3908979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2082838 |
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| End bp | 2084289 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883714 |
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| Product | amidase |
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| Protein accession | YP_485439 |
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| Protein GI | 86748943 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.138584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGA CATTGGACGA ATATGCGGCG CAGGACGGCC TCGGGCTCGC CGCGCTGGTT
CGCAGCGGCG ACGTCAGCGC CGCCGAATTG GCCGCCACGG CGCAGCGGGC GATCGCGGCG
CTCAATCCCA CCATCAATGC CGTCATCGGC GAGGTGCCCG CAGCGTTGCA TGCGCCGGCT
GCCGAAACCG AGGCCGCTTC TTTTCACGGC GTTCCGTTCC TGATCAAGGA TCTGGTGATG
CACGCCGAAG GCGTCGCCTG CGATATGGGG AGCCGCTTCG TGCACGGCAG TTTCGTCTCC
CCGCACGACA CCGAACTGAT GCGGCGCTTC AAGGCCGCCG GGCTGATGAC GCTCGGCCGC
ACCAACACGC CCGAGATGGG CTTCAGCATT TCGACTGAGC CGGTGCTGTA TGGCCCGACC
CGCAATCCGT GGGACCTGAC CCGCTCGGCC GGAGGCTCCA GCGGAGGATC GGCCGCAGCA
GTGGCCGCCG GTCTCGTCCC AGTGGCGCAT GCCAATGACG GCGGCGGGTC GATCCGTATC
CCGGCAGCCT GTTGCGGCGT GGTCGGCCTC AAGCCGACGC GCGGCCGGAC GCCCACCGGG
CCCGAATTCG GCCAACCGCT GAAAGGCATG GGCATCGAGC ATGTGGTCAC CCGCACGGTG
CGCGATTGCG CCGCGCTGCT CGATGCGGTG CAGGGGCCCG GCGTCGGCGA TCCGTTCGAA
ATTCCGCCGC CGGCGCGTCC CTATCTGCAG GAGGTCGGCG TCGAGCCGGG CCGGCTGCGG
ATCGCCTTCT CGCTCGCCGG CGTGATGCAG GCCAAGATCG ACCCGGAGAT GCGCGACGCG
TTGCTTCAGG TGGCCAAGCA TCTCGAGCAG CTCGGCCATC ACGTCGAAGA AGCTTCGCCG
GTGTTCGACG AGGCGCAGTT CCACACCGCC AACCTGACCT ATTGGTGCGG CTTCCTTGCC
GCTGGCATCC TTGGCGTGGG TCAGTTCAAC GGCCGGACGC CGTCGTCGGA GCTGCTCGAA
GCGACGACGC TGGCTTGCTA CGAGCGCGGC CTCGCTCTGA CGTTGGTCGA CGGCGAAATC
GCCGACGCCT TCACCAACAT GGTGTGCCGC AGCGTCGCTC CGTTCTTCCG CCAATACGAC
GTCCTGCTGA CGCCGACGAT GGCGGCTGCG GCGCTCCCGC TCGGCTTCGC CAATGGCGAC
GACGCCTCGC TGGGCGCACA GGGCTGGTAC GATCGTCTGT TCCGCCACGC GCCGTTCACC
GCGCTCTACA ACATGACTGG CCAGCCCGCG ATCAGCCTGC CACTCTGTTC CGATCGCGAA
GGGCGTCCGC TCGGCATGCA GTTCGTCGCG CGTTTCGGCG CTGAGGACCT GCTGATCCGG
CTCGCGGCGC AGCTCGAGCA ATCAATGCCC TGGAAGCAGC GACGGCCCGG CGTTTACGTT
GGAGCGGTGT GA
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| Protein sequence | MALTLDEYAA QDGLGLAALV RSGDVSAAEL AATAQRAIAA LNPTINAVIG EVPAALHAPA
AETEAASFHG VPFLIKDLVM HAEGVACDMG SRFVHGSFVS PHDTELMRRF KAAGLMTLGR
TNTPEMGFSI STEPVLYGPT RNPWDLTRSA GGSSGGSAAA VAAGLVPVAH ANDGGGSIRI
PAACCGVVGL KPTRGRTPTG PEFGQPLKGM GIEHVVTRTV RDCAALLDAV QGPGVGDPFE
IPPPARPYLQ EVGVEPGRLR IAFSLAGVMQ AKIDPEMRDA LLQVAKHLEQ LGHHVEEASP
VFDEAQFHTA NLTYWCGFLA AGILGVGQFN GRTPSSELLE ATTLACYERG LALTLVDGEI
ADAFTNMVCR SVAPFFRQYD VLLTPTMAAA ALPLGFANGD DASLGAQGWY DRLFRHAPFT
ALYNMTGQPA ISLPLCSDRE GRPLGMQFVA RFGAEDLLIR LAAQLEQSMP WKQRRPGVYV
GAV
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