| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1818 |
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| Symbol | |
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| ID | 3908977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2079680 |
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| End bp | 2081596 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883712 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_485437 |
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| Protein GI | 86748941 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.192895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.442759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ATCTGCGGAA TTTCGCCCTC TGGGTCATTA TCGTCTTGCT GCTTTTGGCG
CTGTTTACGC TCTTCCAGAA TCCCGGCCAG CGCGCCGCAT CGCAGGACAT CTCGTTCTCG
CAGCTGCTCA GCGAGGTCGA TCAGAATCAC GTTCGCGACG TGGTGATCCA GGGCCAGGAA
ATTCACGGCA CCTTCACCAA CGGCTCGAGC TTCCAGACCT ACGCGCCGAA CGATCCGTCG
CTCGTTACCC GCCTGTACAA CGGTAAGGTC GCGATCACCG CGAAGCCGCC GGGCGACAAT
GTGCCGTGGT TCGTGTCGCT GCTGGTGTCG TGGCTGCCGT TCATCGCGCT GATTGGCGTC
TGGATCTTCC TGTCGCGGCA GATGCAGGGC GGCGCCGGCA AGGCGATGGG CTTCGGCAAA
TCGCGCGCCA AGATGCTGAC CGAGGCGCAC GGCCGCGTCA CCTTCGAGGA CGTCGCCGGC
GTCGACGAGG CCAAGCAGGA CCTGCAGGAG ATCGTCGAGT TCCTGCGCGA CCCGGGCAAG
TTCCAGCGGC TCGGCGGACG GATTCCGCGC GGCGTGCTGC TGGTCGGTCC GCCTGGCACG
GGTAAGACGC TGATCGCGCG TGCGGTCGCC GGCGAAGCCA ACGTGCCGTT CTTCACCATC
TCCGGTTCGG ACTTCGTCGA AATGTTCGTC GGCGTCGGCG CCTCTCGGGT GCGCGACATG
TTCGAGCAGG CCAAGAAGAA TGCCCCCTGC ATCATCTTCA TCGACGAAAT CGACGCGGTC
GGTCGTCATC GTGGCGCCGG TCTCGGCGGC GGCAATGACG AGCGCGAGCA GACCCTCAAC
CAGTTGCTGG TCGAGATGGA CGGGTTCGAG GCCAATGAGG GCGTGATCCT GATCGCGGCC
ACCAACCGGC CCGACGTGCT CGATCCCGCG CTGCTGCGTC CCGGCCGTTT CGACCGTCAG
GTCGTGGTGC CGAACCCGGA CGTCGTCGGC CGCGAGCAGA TCCTCAAGGT GCATGTCCGC
AAGGTGCCGC TGGCGCCGGA TATCAACCTC AAGACCATCG CGCGCGGCAC GCCGGGATTC
TCCGGCGCCG ACCTGATGAA CCTCGTCAAC GAAGCGGCGC TGATGGCGGC CCGGCGTAAC
AAGCGCATGG TCACCCAGGC CGAATTCGAA GACGCCAAGG ACAAGGTGAT GATGGGCGCC
GAGCGCAAGT CGCTGGTGAT GACGGAGGAG GAGAAGCTTC TCACCGCCTA TCACGAGGGC
GGCCACGCGA TCGTCGGCCT CAATGTTCCG GCCACCGACC CGATCCACAA GGCCACCATC
ATCCCGCGCG GCCGCGCGCT CGGCATGGTG ATGCAGCTTC CCGAGCGCGA CAAGCTGTCG
ATGTCGCTGG AGCAGATGAC CTCGCGCCTC GCCATCATGA TGGGCGGCCG CGTCGCCGAA
GAAATGATCT TCGGCCGCCA GAAGGTGACG TCGGGCGCTT CGTCCGACAT CGAGCAGGCG
ACCCGATTGG CCCGCATGAT GGTCACGCGC TGGGGTCTGT CGGAAGAGCT CGGCACCGTG
TCGTATGGCG AGAACCAGGA CGAAGTATTC CTCGGCATGT CGGTGTCGCG CACCCAGAAC
GCGTCGGAAG CGACGGTTCA GAAGATCGAC GCCGAGATCA AGCGGTTGGT CGAAGAGGGC
TACAAGGAAG CCGAGCGTAT TCTCACCGAG AAGCGCGCGG ACCTCGAAGC CCTCGCCAAG
GGTCTGCTCG AGTTCGAGAC GCTGACCGGC GACGAGATCA CCGATCTCAT GAACGGCAAG
AAGCCGAACC GCGAGTCGGT GCTGGAGCCC TCGGGCCCGC GCACCTCGGC TGTCCCGCCG
GCCGGCAAGC CGCGGCCGCG TCCCGATACT GGCCTGGAGC CGCAGCCCCA GGCGTAA
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| Protein sequence | MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RAASQDISFS QLLSEVDQNH VRDVVIQGQE
IHGTFTNGSS FQTYAPNDPS LVTRLYNGKV AITAKPPGDN VPWFVSLLVS WLPFIALIGV
WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK
FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA
TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDINL KTIARGTPGF
SGADLMNLVN EAALMAARRN KRMVTQAEFE DAKDKVMMGA ERKSLVMTEE EKLLTAYHEG
GHAIVGLNVP ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE
EMIFGRQKVT SGASSDIEQA TRLARMMVTR WGLSEELGTV SYGENQDEVF LGMSVSRTQN
ASEATVQKID AEIKRLVEEG YKEAERILTE KRADLEALAK GLLEFETLTG DEITDLMNGK
KPNRESVLEP SGPRTSAVPP AGKPRPRPDT GLEPQPQA
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