Gene RPB_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1805 
Symbol 
ID3908886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand+ 
Start bp2065983 
End bp2066690 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID637883699 
ProductTetR family transcriptional regulator 
Protein accessionYP_485424 
Protein GI86748928 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.604953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC GCAAGGAAGA GCGCCGCGCC GAGCGCGGCT ATCATCACGG CAATCTGAAG 
GAGGCGCTGC TGCAGGCGGC GCTCGGGCTG ATCGCGGAGA AGGGGCCTGC CGGCTTCACC 
TTCGCCGATG CCGCGCGGAT GGCCGGCGTC AGCCCGGCCG CGCCGTATAG GCACTTCCGC 
GATCGCGAGG AATTGCTCTC GAACATCGCC TACCGCGGCT TCGAACTGTT CGAGCAGGTG 
CTCGCCAAGG CCTGGGACGA CGGCCGTCCC GACACGCTCA CGGCGTTCAA GCGGGTCGGC 
TCGGCCTATC TCGCCTTCGC CCGCAGCGAG CCGGCCTACT ACTCGGCGAT GTTCGAATCC 
GGCGTTCCGG TCGACGCCAA TCCGCTGCTG ATGACGGCGT CGGAACGCGC CTTCAATGTG 
ATTCGCGCCG CCGCCGAACG GCTCGCCGCG CTCACGCCGC CGGGAGTCGC GAGGCCGCCG 
GCGCTGATGA TGGCGCTGCA CATCTGGTCG ATGTCGCACG GCATCGCCTC GCTGTTTGCC 
CGTGGCGATG CCGCGCGGCG CAAGCTGCCG ATGGCCGCGG AAGAGCTGCT GGAAGCCGGC 
GTGCTGATCT ATCTGCGCGG CCTGGGATTC CCGGCCGACC TTCGGTCACA GCCGGAAAAG 
CCTGCAGAAC CAAAGCGTTC CGGACCGTGG GGCGCGGCCC CGCAATAG
 
Protein sequence
MSWRKEERRA ERGYHHGNLK EALLQAALGL IAEKGPAGFT FADAARMAGV SPAAPYRHFR 
DREELLSNIA YRGFELFEQV LAKAWDDGRP DTLTAFKRVG SAYLAFARSE PAYYSAMFES 
GVPVDANPLL MTASERAFNV IRAAAERLAA LTPPGVARPP ALMMALHIWS MSHGIASLFA 
RGDAARRKLP MAAEELLEAG VLIYLRGLGF PADLRSQPEK PAEPKRSGPW GAAPQ