| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1799 |
|---|
| Symbol | |
|---|
| ID | 3908880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2061089 |
|---|
| End bp | 2061928 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637883693 |
|---|
| Product | urease accessory protein UreD |
|---|
| Protein accession | YP_485418 |
|---|
| Protein GI | 86748922 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0829] Urease accessory protein UreH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.307359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGG CCGAAACCAG TGCGGCCGAC TCCGCGGTGT TCGCCGGCAA CCGCGCGCAG
GGCGCGGTGC GGTTCGACGT CCGCGCCGTC GACGGCGTCA CGCGGCGCGG GCAGTTGCAC
GAATCCGGCT CGCTGCGCGT CCGCTTTCCG TCACCCGAGC AGCAGGGCCT CTCGGCCGTG
CTGGTCAATA CCGCGGGCGG CATCGCCGGC GGTGATCGCT TCGGCGTCGA CATCGCGGTC
GGCGAAAGCG CGCGGCTGAC GTTGACCACC GCCGCCGCCG AGAAGATCTA CCGCTCGCAC
GGCCCGGCGG CGCAGCTCGA CATCGCGTTG CAGGTCGCCG AGGGCGGTCA TCTGGCGTGG
CTGCCGCAGG AAACCATCCT GTTCGACCAG GCCCGGGTCG AGCGCCGCAT CGACATCGAT
CTCGCCGCCG GCGCCTCGCT GCTGCTGTGC GAATCCGTGA TCTTCGGCCG CTCGGCGATG
GGCGAGACGA TGCGCAGCGG CCGTTTCACC GATCGCTGGC GGCTGCGGAT CGGCGGCAAA
CTGGTGTTCG CCGAAACCGT TCGGCTCGAC GGCGACATCG GCGCATTGCT GGGCCGGCCG
GCGGTGGCGA AGGGCGGCGT CGCCATCGGC ACCGCGCTGA TCGCGCCCGG CGATGCCGCG
CTGGTCGCGC GGCTGCGCGA GGATGCGGAC GGCTTCGGTG CAGAGGTCGG CATCACCGCC
TGGAATGGAA TTGCAATGGC GCGGTTCTGC GCTCAAGATG CGGCCAAGCT GCGCGCCGAC
ATGATGGCGG TGCTGCGCCG CGCCGCCGGC CGCGCGCTGC CGCGGCTGTG GCTCGGTTAG
|
|---|
| Protein sequence | MIQAETSAAD SAVFAGNRAQ GAVRFDVRAV DGVTRRGQLH ESGSLRVRFP SPEQQGLSAV
LVNTAGGIAG GDRFGVDIAV GESARLTLTT AAAEKIYRSH GPAAQLDIAL QVAEGGHLAW
LPQETILFDQ ARVERRIDID LAAGASLLLC ESVIFGRSAM GETMRSGRFT DRWRLRIGGK
LVFAETVRLD GDIGALLGRP AVAKGGVAIG TALIAPGDAA LVARLREDAD GFGAEVGITA
WNGIAMARFC AQDAAKLRAD MMAVLRRAAG RALPRLWLG
|
|---|
| |