| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1796 |
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| Symbol | |
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| ID | 3908877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2057773 |
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| End bp | 2058978 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883690 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_485415 |
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| Protein GI | 86748919 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0666603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.204182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC ACATCCTCAC CCGCTCGCTC AATCGCAGCG CGACGATTTT CCTGCTGGTG
CTCGCCGTGG TCGGCGTGCT GCTGCCGCTG TCGAATCTGC TGCTGCCGGA AGGCTCGCTG
CTGCACGTGC CGACCTATCT GATCTCGCTG TTCGGCAAAT ATGTCTGCTA CGCGCTGCTA
GCGCTATCGA TCGACCTGAT CTGGGGCTAT TGCGGCATCC TCTCGCTCGG CCACGGCGCG
TTCTTCGCGC TCGGCGGCTA CGCCATGGGG ATGTATCTGA TGCGCCAGAT CGGCGATCGC
GGCGTCTATG CCAATCCGGT GCTGCCGGAC TTCATGGTGT TCCTGAACTA CAAGGAACTG
CCGTGGTACT GGCACGGCTT CGACATGTTC TGGTTCGCCG CGCTGATGGT GCTGGTGGTG
CCGGGCCTCT TGGCGTTCTG CTTCGGCTGG CTGGCGTTCC GCTCGCGCGT CACCGGCGTG
TATCTGTCGA TCATCACCCA GGCGATGACC TACGCGCTGC TGCTCGCGTT CTTCCGCAAC
GATTTCGGTT TCGGCGGCAA CAACGGCCTG ACCGACTTCA AGGACATCCT CGGCTTCAAC
GTTCAGGCCG ACGGCACCCG CGCCGCGCTG TTCGTGCTGA GTTGTCTCGC GCTCGGCATC
GGCTTCCTGA TCTGCCGCGC GGTGGTGACC TCCAAGCTCG GCAAGGTGCT GATCGCGATC
CGCGACGCGG AATCGCGCAC GCGGTTCCTC GGCTACCGCG TCGAATCCTA CAAGTTGTTC
GTGTTCACGC TGTCGGCCTG CATGGCCGGC GTCGCCGGCG CGCTGTATGT GCCTCAAGTG
GGGATCATCA ATCCGGGTGA ATTCGCTCCG GCGAACTCGA TCGAGGCGGT GATCTGGGTC
GCGGTCGGCG GCCGCGGCAC GCTGGTCGGC GCGGCGCTCG GCGCCATCGT GGTCAACTAC
GCCAAGACGG TGTTCACCTC CGGCCCCTTG GCGCCGTACT GGCTGTTCAT GCTCGGCGCG
CTGTTCGTGC TGGTGACGCT GCTGCTGCCC AAGGGGATCA TCGGCACCTT CAACGCCTGG
TGGGAAGGCC GCAAGGAGGA GGGCGCGGAG AGAGACAAGG CGCAGCGCGA CAGCGGGATC
GCCGCCGCAG CCGACAGTGC TGCGCGCGAG GACGGCGTGA TCGAACCGAC CATGGTGAAG
CGATGA
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| Protein sequence | MTPHILTRSL NRSATIFLLV LAVVGVLLPL SNLLLPEGSL LHVPTYLISL FGKYVCYALL
ALSIDLIWGY CGILSLGHGA FFALGGYAMG MYLMRQIGDR GVYANPVLPD FMVFLNYKEL
PWYWHGFDMF WFAALMVLVV PGLLAFCFGW LAFRSRVTGV YLSIITQAMT YALLLAFFRN
DFGFGGNNGL TDFKDILGFN VQADGTRAAL FVLSCLALGI GFLICRAVVT SKLGKVLIAI
RDAESRTRFL GYRVESYKLF VFTLSACMAG VAGALYVPQV GIINPGEFAP ANSIEAVIWV
AVGGRGTLVG AALGAIVVNY AKTVFTSGPL APYWLFMLGA LFVLVTLLLP KGIIGTFNAW
WEGRKEEGAE RDKAQRDSGI AAAADSAARE DGVIEPTMVK R
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