| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1793 |
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| Symbol | |
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| ID | 3908874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2052451 |
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| End bp | 2053926 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883687 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_485412 |
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| Protein GI | 86748916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.353288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA CCAATCTTTT GACCTCGTTT CAGGATTTCG GCCTCGCCGA TCCCATCTCC
CGTGCGCTTC AGGAAGAAAA TTACACCGTC CCGACGCCGA TCCAGGCGCA GACCATTCCC
CTCGCCCTCG CCGGTCGCGA CGTCGTCGGC ATCGCCCAGA CCGGCACCGG CAAGACCGCG
TCCTTCGCGC TGCCGATCCT GCACCGCATC CTTGAAAACC GCATCAAGCC GCAGCCGAAG
ACCTGCCGCG TCCTGGTGCT GAGCCCGACC CGCGAACTCT CCGGGCAGAT CCTCGACAGC
TTCAACGCCT ATGGCCGCCA CATCCGCCTC AGCGCGACGC TGGCGATCGG CGGCGTGCCG
ATGGGCCGCC AGGTCCGCTC GCTGATGCAG GGCGTGGAAG TGCTGGTCGC CACCCCGGGC
CGCCTGCTCG ACCTCGTGCA GAGCAACGCG CTGCGCCTCG GCCAGGTCGA GTTCCTGGTG
CTCGACGAAG CCGACCGCAT GCTCGACATG GGCTTCATCA ACGACATCCG GAAGATCGTC
GCGAAACTCC CGATCAAGCG CCAGACGCTG TTCTTCTCGG CCACCATGCC GAAGGACATC
GCCGACCTCG CCGAGCAGAT GCTGCGCGAT CCGGCCCGCG TCGCGGTGAC GCCGGTGGCC
TCCACCGTCG AGCGCATCAA CCAGCGCGTG ATCCATCTCG ATCACTCCGC CAAGCCGGCG
ATGCTCGCCA CCATCCTGCA GCAGGACGGC GTCAACCAGG CGCTGGTGTT CACGCGCACC
AAGCACGGCG CCGACAAGGT GGTGAAGGGC CTGCAGCGCG CCGGCATCAC CGCCGACGCC
ATCCACGGCA ACAAATCGCA GAACTATCGC GAGCGCGTGC TCGCGGCGTT CCGTACCGGC
GAACTGCGCA CGCTGGTCGC CACCGATATC GCCGCCCGCG GCATCGATGT CGACGGCGTC
TCCCACGTCG TCAATTTCGA CCTGCCGAAC ATTCCCGAGA CCTACGTCCA CCGGATCGGC
CGCACCGCGC GCGCCGGCGC CGAGGGCACC GCGATCTCGC TGTGCGCCGG CGGCGAAGAG
ACCGGCTATC TGCGCGACAT CGAGAAGCTG ATCCGGATCG CGCTGCCGAA GGAAGACCAT
CGCACCCCGG GCGCGAAGCC CGCGCCGTCC ACCGCGCCGC AGCGTGGCGG CCAGCGCAAC
GGCCAGCAGC GCAATGGCCA GCAGCGCAGC GGCGGCCAGC GCAACGGCGC CGCACCGCAC
GCGGCCCGCG GCGACGCTGC TCCCGGATCG AACGACCCGC GCCGCCCGCG ACGCGCCGGC
GGCCCGAATG CCGGACGCAA CCCGGACGCG GCCCGGCACG AACCGGCGGT ACGGCCCCAG
CACGGCGGAC AGGCCGAAGG CCTGCAGGGC GTCGCATTTT TGCAGCGCAA GAATGATCGC
CCCGCAAAGA CCACCAATCA ACGCCCGCAA CGCTGA
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| Protein sequence | MERTNLLTSF QDFGLADPIS RALQEENYTV PTPIQAQTIP LALAGRDVVG IAQTGTGKTA
SFALPILHRI LENRIKPQPK TCRVLVLSPT RELSGQILDS FNAYGRHIRL SATLAIGGVP
MGRQVRSLMQ GVEVLVATPG RLLDLVQSNA LRLGQVEFLV LDEADRMLDM GFINDIRKIV
AKLPIKRQTL FFSATMPKDI ADLAEQMLRD PARVAVTPVA STVERINQRV IHLDHSAKPA
MLATILQQDG VNQALVFTRT KHGADKVVKG LQRAGITADA IHGNKSQNYR ERVLAAFRTG
ELRTLVATDI AARGIDVDGV SHVVNFDLPN IPETYVHRIG RTARAGAEGT AISLCAGGEE
TGYLRDIEKL IRIALPKEDH RTPGAKPAPS TAPQRGGQRN GQQRNGQQRS GGQRNGAAPH
AARGDAAPGS NDPRRPRRAG GPNAGRNPDA ARHEPAVRPQ HGGQAEGLQG VAFLQRKNDR
PAKTTNQRPQ R
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