Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1785 |
Symbol | |
ID | 3908866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2047239 |
End bp | 2048036 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883679 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_485404 |
Protein GI | 86748908 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.634606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.33721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG CGCGCATCGT CGTTCTTGTG ATTGCCGTCG GCGCCGGCGC CGTCGCCGCC TATCTGGCGA GCGGCATCGG CGGACAGGAG ACGGCCGGCC CGACCGCGCC CGTCGCCCAA CTGGCGACGG TCGAAGTGCT GGTCGCGAAG TCCGACATCC CGCTCGGCCA GCCGGTCGGG CCCTCGGACG TGCAGTGGCA GACCTGGCCG GCCGCCACCG CCAGCTCGAA TTTCATCCTT CGCAGCGAGC GCCCCGACGC CAGCGTCCAG CTCGCCGGCT CGATCGCGCG GTCGCCCTTC ATCGCCGGCG AACCGATCCG CGAACAGAAA CTGGTGAAGT CCAACGGCTC CGGCTTCATG GCCGCGATCC TGCCGACCGG GATGCGCGCG ATCTCGACCG AGATCTCGCC GGAAACCGGC GCCGGCGGCT TCATCCTGCC GAACGATCGC GTCGACGTCA TCCTGTCGAA GCGCGACCAG AATCCCGATC GCGTCAAGGG CGGCGACGTC GTCAACTCCG AGATCATCCT CAGCAATATC CGCATTCTGG CGATCGACCA GACCGTCGAG GAGAAGAACG GCCAGAAGGT CGTGGTCGGC AAGACCGCGA CGCTCGAACT GAAACCCGAT CAGGCGGAAT TCCTGGCGCG TGCGCGGCAG AGCGGCACCC TGTCGCTGGC GCTGCGCAGC CTCGCGGACG CCAACGCACC GGCCCGCACC GAGGAGATCG GCGGCAAGCG CGACAGCATC AACGTGATTC GCTTCGGCGT TTCCACGCAA ACGACGACGC CGAAGTGA
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Protein sequence | MNTARIVVLV IAVGAGAVAA YLASGIGGQE TAGPTAPVAQ LATVEVLVAK SDIPLGQPVG PSDVQWQTWP AATASSNFIL RSERPDASVQ LAGSIARSPF IAGEPIREQK LVKSNGSGFM AAILPTGMRA ISTEISPETG AGGFILPNDR VDVILSKRDQ NPDRVKGGDV VNSEIILSNI RILAIDQTVE EKNGQKVVVG KTATLELKPD QAEFLARARQ SGTLSLALRS LADANAPART EEIGGKRDSI NVIRFGVSTQ TTTPK
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