| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1761 |
|---|
| Symbol | |
|---|
| ID | 3909748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2014928 |
|---|
| End bp | 2016088 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637883655 |
|---|
| Product | nitrate transporter component, nrtA |
|---|
| Protein accession | YP_485380 |
|---|
| Protein GI | 86748884 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.786473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0141893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC GCCTGCGCAT CGGATTCATC CCGCTGGCCG ACGCCGCGGC GCTGATCGTC
GCCGTCGACA AGGGGTTCTG CGCCACCGAG GGGCTCGACG TCGAGCTGGT GCGCGAAATC
TCCTGGGCCA ATGTCCGCGA CAAATTCAAC ATCGGCCTAT TCGACGCCGC GCATCTGTTG
GCGCCGATGG CGGTCGCCTC CAGCCTCGGC ATCGGCCACA TCAAGGTGCC GGTGATTTCC
GGCTTCGGCC TCGGCGTCAA CGGCAACGCC ATCACGGTGT CGCCGGATCT GCAGGCTGCG
ATCGCGGCGA TGGCCGAGGG CGACGTCGCC GATCCGCTGG TGTCGGCGCG GGCGCTGGCG
CGCGTCGTCG CCGAGCGCAA GGCGCTGGGG CTGGAGCCGC TGATCTTCGG CATGACCTTC
CCGTTCTCCA GCCACAATTA CGATCTGCGG TTCTGGATGG GCGCTGGCGG GGTCGATCCC
GACGAAGACG TCCGCCTCGT GGTGCTGCCG CCGCCCTACA TGGTCGAGAG CCTCGCCAAC
AAACATCTCG ACGGCTTCTG CGTCGGCGCG CCGTGGAATT CGGTGGCGAT CGATCTCGGC
ATCGGCCACA TCCTGCATTT CTCCTGCGAG CTGTTCCAGC GCGCCGCGGA GAAGATGCTG
GCGGTGCGCG CCTCATGGGC CGAAGGACAT CCGGAGACGC TGGCGCGGCT GATCCGGGCG
CACGATCGCG CCGCGCAATT CATCGAGCAC GAACCCAATC GCGACGAGGT CTGCGCGATT
CTCACCGCGC CGGGCCGGAT CGAAGTGACG CCGGAGCTGA TCCGCCGCAC CCTGGACGGC
CGCCTCAAAG TCTCGCCCGA AGGCCGCATC CGCGAGACCG GCCGCTATCT GCTGGTCGGC
CGCGAAGCCG CGGCACGGCC CGATCCGGTG CAGGGCGCGT GGAACTACGC GCAGATGGTG
CGCTGGGGCC AGGCGCCGCT GTCGGCCGAA CTGCTCGCCG CCGCCAAGGC TGTGTTCCGG
CCCGACCTCT ACGACGCCGC CGTCGGCACG CCGCCGATCC TGCCGATCGC GCCCGCCGAC
GGCATCGGCG AATGCACCGG CACGCATTTC GATCCGGACG ACATCGCCGG CTATCTGTCG
GCGCTGACGA TCCGGCGCTG A
|
|---|
| Protein sequence | MSERLRIGFI PLADAAALIV AVDKGFCATE GLDVELVREI SWANVRDKFN IGLFDAAHLL
APMAVASSLG IGHIKVPVIS GFGLGVNGNA ITVSPDLQAA IAAMAEGDVA DPLVSARALA
RVVAERKALG LEPLIFGMTF PFSSHNYDLR FWMGAGGVDP DEDVRLVVLP PPYMVESLAN
KHLDGFCVGA PWNSVAIDLG IGHILHFSCE LFQRAAEKML AVRASWAEGH PETLARLIRA
HDRAAQFIEH EPNRDEVCAI LTAPGRIEVT PELIRRTLDG RLKVSPEGRI RETGRYLLVG
REAAARPDPV QGAWNYAQMV RWGQAPLSAE LLAAAKAVFR PDLYDAAVGT PPILPIAPAD
GIGECTGTHF DPDDIAGYLS ALTIRR
|
|---|
| |