| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1752 |
|---|
| Symbol | |
|---|
| ID | 3909739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2002749 |
|---|
| End bp | 2005442 |
|---|
| Gene Length | 2694 bp |
|---|
| Protein Length | 897 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637883646 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_485371 |
|---|
| Protein GI | 86748875 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0232031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC CGACGCAACA CCCGCCCGCG GTGCGCACCA CCTGCGCCTA TTGCGGCGTC
GGCTGCGGCG TGCTCGCCAA GCCCGATGGA CGAGGCGGCG CAGCAATCAC CGGCGATCCG
GAGCATCCGG CGAATTTCGG CCGGCTGTGC TCGAAGGGCT CGGCGCTCGG CGAAACGCTG
GCGCTCGACA CAAGGCTGCT GCATCCGATG CGACGCGGCG CCGACAGCGC AATGGCACGC
ACGTCCTGGG ATGATGCGCT GGACACGGTT GCGAACGGCT TTGCGGATGT CATCGCCAAG
CACGGCCCGG ACTCGGTCGC GTTCTATCTG TCGGGCCAAT TGCTCACCGA GGATTACTAC
GTCGCAAACA AGCTGATGAA GGGTTTTGTC GGCTCGGCCA ATGTCGACAC CAATTCGCGA
CTGTGCATGG CCTCCTCGGT CGCCGGCCAT CGCCGCGCTT TCGGCAGCGA CACCGTGCCG
GGGACCTACG CCGATCTCGA TCAGGCCGAC CTGATCGTGC TGGTCGGCTC CAACGCCGCC
TGGTGCCATC CGGTGCTGTA TCAGCGCATC ATCGCCAACA AGCGCGCGCG CGGTGCGACA
ATCGTGGTGA TTGATCCGCG CCGCACCGCG AGCGTCGAGG ACGACGATTT GCACCTGCCG
GTCGCGCCCG GCATGGACAC CGTGCTGTTC AGCGGCTTGC TCGTACATCT CGCCGATACG
CTGGCGCTCG ACGACGCCTA TCTCGAGGCC CACACCACCG GCCTCACCGA GGCGCTGGTG
CGCGCTCGGG AGATCGCGCC GGACATCGCC GCGACGGCGG CTATGACGGG CGTCGACGCG
GCCGACATCG CGCGCTTCTT CGCGCTGTTC CGCGCCACAG AGCGCGTCGT GACCTGTTAT
TCGCAAGGCG TCAATCAGTC GGCGCAAGGC ACCGACAAGG TCAACGCCAT CATCAACTGC
CATCTCTCCA CCGGGCGGAT CGGCCGGCCC GGCATGGGGC CGTTCTCGCT CACCGGGCAG
CCCAACGCGA TGGGCGGTCG CGAGGTCGGC GGCCTCGCCA ATCAGCTCGC CGCGCATATG
GGCTTCGACG CCGAGGCGAT CGATCGCGTC GGCCGGTTCT GGCGCGCGCC GAACATGGCG
CGGCGCGAAG GGCTGAAGGC GGTGCAATTG TTCGAGGCGA TCGACCGCGG CGAGATCAAG
GCGCTGTGGA TCATGGCCAC CAACCCGGCA GTGTCGCTGC CCCGCGCCGA CGTCGTGCAG
GAGGCGCTGC GGAAGCTAGA CCTCTTGGTG ATCTCCGAGA ACGTGATCAG CAACGACACC
GTCGCCGCCG GCGCGCATGT GCTGCTGCCG GCGGCCGCTT GGGGCGAGAA GGACGGCACC
GTCACCAATT CGGAACGCCG GATCTCGCGG CAACGGGCGT TCCTGCCGCT GCCGGGCGAG
GCGAAGCCGG ATTGGTGGAG CGTCGCGCAG GTCGCGCAGC GCATGGGATT CGGCGACGCT
TTCGCTTATC ACTCGGCCGC GCAGGTGTTT CGCGAGCACG CCGCACTCTC GGCTTTCGAG
AACGACGGCC GCCGCGATTT CGACATCGGC GCGTTGGCCG ACCTCAGTGA CGAGGCCTTC
AACGCGCTCG ATCCGGTGCA ATGGCCGGCG CGCGCGGGCA AGCCTGCGAC CGACACGCGA
TTCTTCGCCG ACGGGCATTT CTTCACGCCC GATGGTCGCG CGCGGCTGAT CGCGCCGGCG
ATGCCAGCCT TGCACGAAGC GCCCTCGCCC GCGTTCCCGC TGCTGCTCAA CACCGGCCGC
GTTCGCGACC AGTGGCACAC CATGACTCGC AGCGGCCTCA GCCCGCGGCT CGGCGCGCAT
CTGCCGGAGC CGTTCGTCGA GCTGCATCCG GACGATGCGG CAGCGGCCGG CTTGAAGGAC
GGCGGCTTCG CGCGCATCAC GACGACGCAC GGCGCTTGCA TCCTCAAGGT GATCGTCAGT
GCCGGTCAAC GCCGCGGCTC GCTGTTCGCG CCGATCCATT GGAGCGGCGA GACCGCGGCG
ACGGCGCGCG TCGGCGCGCT GGTGGCGCCG GTCACCGATC CGTTCTCGGG TCAGCCGGAA
GCCAAGGCGA CGCCGGCCGC GATCGCGCGA GTCGACTACG CGCTGCGCGG CTTCGTGCTG
TCGCGGCAAC CGCTGACGCT GTCCGGGGAC GATTGGTGGG CACGCGTCGC GGTGCGCAAC
GGCGCGGGCC TGCTGATCGC GAGCGACGAA CCCGCCTCCG CGTGGCGCGG TCGCGCCGCG
ACGCTGTTCG GCGACGGCGT CGAGCTCGCC GAGTATCTCG ACGCACCGCG CCAGAGTTTT
CGCGCGGCGG CGTTCGAGAA CGGTCGGCTG ATCGGCTGCC TGTTCGTCGG CCCGGCCGAG
GCGACGCCGA CATGGGACGC GGTGAAGACG CTGTTCGAGG CTGACGCGCT GCCCGATCGG
CAGCGCCGCG CCGTGCTGTC CGGCCGCTCC ACCGACGGCG TCGCCGACAC CGGACCGATC
GTCTGCGCCT GCTTCGGCGT CGGCCTCACC AGCATCCGCG ACGCGATCGA GAGCGCCGCC
GCGATCAGCG TCGACGACAT CGGCAGGCAC CTGCGCGCCG GCACCAATTG CGGCTCGTGC
CTGCCGGAGC TGCGCAAGAT CGTGGCGGGG GCGAAGGTGG GCGAGACGGT CTGA
|
|---|
| Protein sequence | MNAPTQHPPA VRTTCAYCGV GCGVLAKPDG RGGAAITGDP EHPANFGRLC SKGSALGETL
ALDTRLLHPM RRGADSAMAR TSWDDALDTV ANGFADVIAK HGPDSVAFYL SGQLLTEDYY
VANKLMKGFV GSANVDTNSR LCMASSVAGH RRAFGSDTVP GTYADLDQAD LIVLVGSNAA
WCHPVLYQRI IANKRARGAT IVVIDPRRTA SVEDDDLHLP VAPGMDTVLF SGLLVHLADT
LALDDAYLEA HTTGLTEALV RAREIAPDIA ATAAMTGVDA ADIARFFALF RATERVVTCY
SQGVNQSAQG TDKVNAIINC HLSTGRIGRP GMGPFSLTGQ PNAMGGREVG GLANQLAAHM
GFDAEAIDRV GRFWRAPNMA RREGLKAVQL FEAIDRGEIK ALWIMATNPA VSLPRADVVQ
EALRKLDLLV ISENVISNDT VAAGAHVLLP AAAWGEKDGT VTNSERRISR QRAFLPLPGE
AKPDWWSVAQ VAQRMGFGDA FAYHSAAQVF REHAALSAFE NDGRRDFDIG ALADLSDEAF
NALDPVQWPA RAGKPATDTR FFADGHFFTP DGRARLIAPA MPALHEAPSP AFPLLLNTGR
VRDQWHTMTR SGLSPRLGAH LPEPFVELHP DDAAAAGLKD GGFARITTTH GACILKVIVS
AGQRRGSLFA PIHWSGETAA TARVGALVAP VTDPFSGQPE AKATPAAIAR VDYALRGFVL
SRQPLTLSGD DWWARVAVRN GAGLLIASDE PASAWRGRAA TLFGDGVELA EYLDAPRQSF
RAAAFENGRL IGCLFVGPAE ATPTWDAVKT LFEADALPDR QRRAVLSGRS TDGVADTGPI
VCACFGVGLT SIRDAIESAA AISVDDIGRH LRAGTNCGSC LPELRKIVAG AKVGETV
|
|---|
| |