Gene RPB_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1746 
Symbol 
ID3909733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1993596 
End bp1995695 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content68% 
IMG OID637883640 
Productenoyl-CoA hydratase 
Protein accessionYP_485365 
Protein GI86748869 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0570089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG TCGTCACGCG CGAACGGCAC GATGGTATCG CGATCGTCAC CGTCGACAGC 
CCGCCGGTCA ACGCGCTCAG TGCGGCTGTT CGCCGCGGCA TTCTGGAAAA CGTCAACGCG
GCGGTCGCCG ATCCCGAAGT GCAGGCGATC GTGTTGACCT GTGCGGGGCG CACCTTCATC
GCCGGCGCCG ACATCACCGA GTTCGGCAAG CCGCCGCAGC CGCCGGCGCT CAACGACGTC
ATCGCCGCGC TGGAGAACTC GCCGAAGCCG ACCATCGCGG CGATTCACGG CACCGCGCTC
GGCGGCGGCC TCGAAGTCGC GCTCGGCTGC CATTTCCGCG TCGCGGTGAA GGAGGCCAAG
CTCGGCCTGC CCGAAGTCAA GCTCGGTCTG CTGCCGGGCG CCGGCGGCAC GCAGCGGCTG
CCGCGCGCGG TCGGCCCCGA ACTCGCGGTG CAGATGATCG TCGGCGGCAA TCCGATTGGT
GCCGCGGAAG CGCTGAAGCA CGGTCTGATC TCCGAGATCG TCGAAGGTCC GGCCTCCGGC
GGCGAGGCGT TCGCCCGCAA GGTGCTGGCC GAGAAGTTGC CCGCGCGCCG GCTGCGCGAC
GACGACTCCA AGCTCGCCGC CGCCCGCGCC GATCGCTCGA TCTTCACCAA CGCGGTGGCG
GCGATGACCA AGAAGGCGCG CGGCCTCGAG GCGCCGTTCG CCTGCGCCGA CGCGATCGGC
GCCGCGATCG ACCTGCCGTT CGAGGAAGGT CTGAAGAAGG AGCGCGAGGG CTTCATGAAG
CTCGTGGTCA GCGACCAGTC CAAAGCGCAG CGCTACGCCT TCTTCGCCGA GCGCGAGGCC
GCCAAGGTCG ACGGCGTGCC GGACGGCACC AAGCCGCGCC CGGTGTCGCG CGTCGCGATC
ATCGGCGCCG GCACCATGGG CGGCGGCATC GCGATGTCGT TTGCGAACGC CGGCATTCCG
GTGACGCTGA TCGAGACCGG CAAGGAGCAG CTCGATCGCG GCATGGGCAT CATGCAGAAG
AACTACGAAG CCACCGCGGC GCGCGGCGGC ATCCCGGCGG ATGCGCCGGC CAAGCGGATG
GGCCTGATCA CCGGCATGGT CGGCCTCGAC AACGTCAAGG ACGCCGATCT GATCATCGAG
GCGGTGTTCG AGACCATGGC GGTGAAGAAG GAAGTCTTCA CCGCACTCGA CGCCTACGCC
AAGCCCGGCG CGGTGCTGGC GTCGAATACG TCGTATCTCA ACGTCGACGA CATCGCGGCG
ACCACCAAGC GGCCGCAGGA CGTGCTCGGC ATGCACTTCT TCTCGCCGGC GAACGTGATG
AAGCTGTGCG AGATCGTGCG CGGCGCCAAG ACCGCGCCGG ACGCGCTGCT CACCGCGGTG
TCGATCGCCA AGAAGATCGC CAAGGTGCCG GTCGTCGTCG GTGTCTGCGA CGGCTTCGTC
GGCAACCGCA TGCTCGCGGC CCGCTCCAAG CAGTCCGAGA AGCTGCTGTT CGAAGGCGCG
CCACCGCAGC AGGTCGACGC CGTCGTCACC AAATTCGGCA TGCCGATGGG CCCGTTCGCG
ATGGGCGATC TCGCCGGCCT GGACATCGGC TGGCGCTCCC GCAAGGACCG CGGCATCAAG
TCGGAGATCG CCGACGCGCT GTGCGAGGCC GGCCGCTTCG GCCAGAAGAC CGGCAAGGGC
TACTACAAGT ACGAAGCCGG TTCGCGTTCG CCGCTGCCTG ATCCCGAAGT CGAAACGCTG
ATCAACGACA CGCTGACCAA GCTCGGCCTC AAGCGCCGCG AGGTCAGCGA CGAGGAGATC
CTCGAGCGGA TGATGTATCC GATGATCAAC GAGGGCGCGC GTATCCTCGA GGAGAACATC
GCGGCGCGGC CGAGCGACAT CGACGTGGTC TGGCTGTACG GCTACGGCTG GCCGATCTAT
CGCGGCGGCC CGATGCACTA CGCCGACGGC GTCGGCCTCA AGCACATCGC CGAGCGGCTC
AGCTACTACG CCAAGGCCAC CAACGACCCG TCGCTGGAGC CCTCGCCGCT GCTGAAGAAG
CTCGCCGCCG AAGGCAAGAC CTTCGCCTCG CTCGGCCAGC CCAACAAGGC GGCGGCGTGA
 
Protein sequence
MSEVVTRERH DGIAIVTVDS PPVNALSAAV RRGILENVNA AVADPEVQAI VLTCAGRTFI 
AGADITEFGK PPQPPALNDV IAALENSPKP TIAAIHGTAL GGGLEVALGC HFRVAVKEAK
LGLPEVKLGL LPGAGGTQRL PRAVGPELAV QMIVGGNPIG AAEALKHGLI SEIVEGPASG
GEAFARKVLA EKLPARRLRD DDSKLAAARA DRSIFTNAVA AMTKKARGLE APFACADAIG
AAIDLPFEEG LKKEREGFMK LVVSDQSKAQ RYAFFAEREA AKVDGVPDGT KPRPVSRVAI
IGAGTMGGGI AMSFANAGIP VTLIETGKEQ LDRGMGIMQK NYEATAARGG IPADAPAKRM
GLITGMVGLD NVKDADLIIE AVFETMAVKK EVFTALDAYA KPGAVLASNT SYLNVDDIAA
TTKRPQDVLG MHFFSPANVM KLCEIVRGAK TAPDALLTAV SIAKKIAKVP VVVGVCDGFV
GNRMLAARSK QSEKLLFEGA PPQQVDAVVT KFGMPMGPFA MGDLAGLDIG WRSRKDRGIK
SEIADALCEA GRFGQKTGKG YYKYEAGSRS PLPDPEVETL INDTLTKLGL KRREVSDEEI
LERMMYPMIN EGARILEENI AARPSDIDVV WLYGYGWPIY RGGPMHYADG VGLKHIAERL
SYYAKATNDP SLEPSPLLKK LAAEGKTFAS LGQPNKAAA