| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1742 |
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| Symbol | |
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| ID | 3909729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1990115 |
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| End bp | 1990993 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883636 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_485361 |
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| Protein GI | 86748865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0350501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0888724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTC TGCTGAATCA GGTCCTGGCA GGTATCGCCA CCGGCGCCAT CTACGCATGT
ATGGCGCTGG CCGTGGTGAT GATCTATCAG GCGATCGACC ACCTCAACTT CGCCCAGGGC
GAAATGGCGA TGTTCTCCAC GTTCATCGCC TGGCAGATGC TGCAATGGGG CGTGCCGTAT
TGGGGCGCTT TCGTGCTGAC GCTGGCGCTC TCCTTCGCGG GCGGCATCGT CATCGAGCGG
GCGTTGTTCA AGCCGCTCGG CAACGCGCCG GTGCTGACCC ACGTCGCGGG TTTCATCGCG
CTGTTCGCGA TCGTCAACTC GGTCGCGGGC CTGACCTGGG ACTTCACCAT CAAGCAGTTC
CCGTCGCCGT TCGGCTCGTC GCCCTTCCTC GGCAGCCAGC TGATCTCGAC GCACCAGGCC
GGCATGATCG GCGTCACGCT GGTGCTGCTG CTGCTGCTGT ACTTCTTCTT CCAGTTCACC
CGCATCGGCT TGGCGATGCG CGCGGCCGCG GCTCAGCCGG AGTCCGCGCG TCTCGTCGGC
ATCAACACCT CGTGGATGGT GGCGCTGGGC TGGGGCATGG CGGCGGCGAT CGGCTCGATT
GCCGGCATGC TGATCGCCCC GGTGGTGTTC CTCGAACCCA ACATGATGGG CGGCGTGCTG
ATCTACGGGT TCGCCGCGGC GGTTCTCGGC GGGCTGTCCA GCCCGCTCGG CGCGGTGATC
GGCGGGTTCC TGGTCGGCGT GTTCGAGAAC CTGGCCGGGA CCTACATCCC CGGCGTCGGG
AACGAATTGA AACTCCCGAT CGCGCTGGCG CTGATCGTCA CCGTCCTGGT CGTCAAACCC
ACCGGCCTGT TCGGCCGTGC CATCGTCAAG CGAGTCTGA
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| Protein sequence | MELLLNQVLA GIATGAIYAC MALAVVMIYQ AIDHLNFAQG EMAMFSTFIA WQMLQWGVPY
WGAFVLTLAL SFAGGIVIER ALFKPLGNAP VLTHVAGFIA LFAIVNSVAG LTWDFTIKQF
PSPFGSSPFL GSQLISTHQA GMIGVTLVLL LLLYFFFQFT RIGLAMRAAA AQPESARLVG
INTSWMVALG WGMAAAIGSI AGMLIAPVVF LEPNMMGGVL IYGFAAAVLG GLSSPLGAVI
GGFLVGVFEN LAGTYIPGVG NELKLPIALA LIVTVLVVKP TGLFGRAIVK RV
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