| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1740 |
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| Symbol | |
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| ID | 3909727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1987652 |
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| End bp | 1988959 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883634 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_485359 |
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| Protein GI | 86748863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.398941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.157953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTCG GCGCGCGATC CGGCATATAC AGGGCGGATT CCGCCGCGCC ACGCGGCCCG
ATGCGAGACC CGATCATGCT TTCCGATGCC TTCCGGTGCA CGCGATGGAC CGCGTTGCTC
ACCGTTCTCT TCGCCGTCGT CGCTGCGTCG CCGGCGCTTT CCCAGAAGCG CTACGATCCC
GGCGCCAGCG ACACCGCGAT CCGGATCGGC AATCTGATGC CCTATTCCGG CCCGGCCTCG
GCCTATGCCA TCGTCGGCCG CATCGAGCAG GCCTATTTCC GGATGATCAA CGACCAGGGC
GGCATCAACG GCCGCCGGAT CGAGTTCATT TCCTATGACG ACGCCTACAG CCCGGCCAAG
GCGGTGGAGC AGACGCGCAG ACTGGTCGAA AGCGACGAGG TGCTGCTGGT GTTCAGCGCG
ATGGGCACGC CCTCGAACAC CGCGATCCAG AAATATCTCA ACGCCAAGGG CGTCCCGCAA
CTGTTCGCCG CGAGCGGCGC GACGCGGTTC GGCGACCCGA AGGGCTTTCC CTGGACGATG
GGCTGGCAGC CGCCCTACCA GGTCGAGGGC CGCGTCTACG CCAAATACAT CCTCGCCAGC
AGGCCCGAGG CCCGGATCGC GGTGCTGTAT CAGAACGACG ACCTCGGACG CGACCTGCTG
AAGGGGCTGA AGGACGGGCT CGGCGACCAC GCGACGCAGA TCGTCGCCGA GGAGAGCTAC
GAAGTCGCCG AGCCTTCCGC CGATAACCAC ATCGCCCGGC TGAAGGCGTC GGGCGCCGAC
GCGTTCGTCA GCATCACCAC GCCGAAATTC GCGGCGCAGA GCATCCGCAC GGCCGCCGAG
ATGCAATGGC GTCCGCTGTA TCTGCAGGCG CTGGTGTCGG CCTCGATCGG CGCGGTGCTG
CGGCCGGCCG GGCTCGACCA CGCGCAGGGA CTCATTTCCG CGGCCTACAA CAAGGACGCC
GCCGATCCGC AATGGACCGA CGACCCCGGC ATGAAGCGGT TCCATGCCTT CCTCGATACC
TACGCGCCGG ACGTCAACCG CGGCGACAAT TCGGTGATCT ACGGCTACGG TGCGGCGCAA
TGCCTCGTCG AGGTCCTGCG CCGTGCCGGC GACACGCTGA CGCGCGCCAA TGTGATGCGC
GAAGCGGCCA GTCTCGAAGG CTACGCGCCC GACACGCTGC TGCCGGGCAT CACCATCACC
ACCGCGGCGA ACGACTTTCA TCCGATCGAA CAGCTGCGCT TGATGCGTTT CGAGGGCGAC
CACTGGCGCT TGTTCAGACC GGTGATCGAC GCCGACCTGC GCAACTGA
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| Protein sequence | MGLGARSGIY RADSAAPRGP MRDPIMLSDA FRCTRWTALL TVLFAVVAAS PALSQKRYDP
GASDTAIRIG NLMPYSGPAS AYAIVGRIEQ AYFRMINDQG GINGRRIEFI SYDDAYSPAK
AVEQTRRLVE SDEVLLVFSA MGTPSNTAIQ KYLNAKGVPQ LFAASGATRF GDPKGFPWTM
GWQPPYQVEG RVYAKYILAS RPEARIAVLY QNDDLGRDLL KGLKDGLGDH ATQIVAEESY
EVAEPSADNH IARLKASGAD AFVSITTPKF AAQSIRTAAE MQWRPLYLQA LVSASIGAVL
RPAGLDHAQG LISAAYNKDA ADPQWTDDPG MKRFHAFLDT YAPDVNRGDN SVIYGYGAAQ
CLVEVLRRAG DTLTRANVMR EAASLEGYAP DTLLPGITIT TAANDFHPIE QLRLMRFEGD
HWRLFRPVID ADLRN
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