| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1739 |
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| Symbol | |
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| ID | 3909726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1986262 |
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| End bp | 1987494 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637883633 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_485358 |
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| Protein GI | 86748862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.152869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTT CGCCTTCGCG CGCGCTCGTC TTTTCAGCAG CCGTCGCGGT CAGCCTCGCA
GCGTTCAACG GCGCTGCCTT CGCTCAAAAA AAATACGACA CCGGCGCCTC CGATACCGAG
ATCAAGATCG GCAACATCAT GCCCTATTCG GGCCCGGCCT CGGCCTACGG CACGATCGGC
AAGACCGAAG AAGCCTACTT CCGGATGGTG AACGAGAACG GCGGCATCAA CGGCCGCAAG
GTCAACTTCA TCAGCTATGA CGACGCCTAT TCGCCGCCGA AGGCGGTCGA ACAGGTCCGC
AAGCTGGTCG AGAGCGACGA AGTGCTGGCG GTGTTCAACC CGCTCGGCAC GCCGTCCAAC
ACCGCGGTCC AGAAATATCT CAACGCCAAG AAAGTGCCGC AACTGTTCGT CGCCACCGGC
GCCACCAAGT GGAACGATTC GAAGAACTTC CCCTGGACGA TCGGCTGGCA GCCGTCCTAC
CAGAGCGAAG CGCAGATCTA CGCCAAGTAC CTGCTGAAAG AGAAGCCGGA CGCCAAAATC
GGCATCCTCT ATCAGAACGA CGATTTCGGC AAAGACTATC TGAAGGGCAC CAAGGACGGC
CTCGGCGCCA AGGCCGCCTC GATGATCATC GCCGAAGAGA GCTACGAGAT CTCGGCGCCG
ACCATCGACA GCAACGTCGT CAAGCTGAAG TCGGCCAATC CCGACGTCGT GCTGGTCTAC
ACCACGCCGA AATTCGCCGC GCAGACCATC AAGAAGATCG CCGAACTGAG CTGGAAGCCG
CTGGTGATCC TCACCAACGT CTCGGCCTCG GTCGGCAGCG TGATGCAGCC CGCCGGCTTC
GAAAACGCCC AGGGCGTGCT GTCGGCGAAC TACGCGAAGG ACCCGACCGA CCAGCAGTGG
GACAGCGATC CGAAGTTCAA AAAGTGGCAC GCCTTCGTCG AGAAATACAT GCCGGGCTCC
AACAAGAACG ACAGCAACAT GGTCTACGGC TACGGCGCCG CCCAGACGCT GCACAAGGTG
CTGGAGATGT GCGGCGACGA CCTGACCCGC GCCAATTTGA TGAAGCAGGC CGCCAGCCTC
AAGGACTTCG AGCCGGACAC CCTGTTGCCC GGCGTCAAGA TCAATACCTC GGCGACCGAC
TTCGCGCCGA TCAGCCAACT CCAGATGATG CGCTTCAAGG GCGACAGGTG GGAGCTGTTC
GGCGAGATCA TCTCCGGCGA CATCACCCAG TAA
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| Protein sequence | MPTSPSRALV FSAAVAVSLA AFNGAAFAQK KYDTGASDTE IKIGNIMPYS GPASAYGTIG
KTEEAYFRMV NENGGINGRK VNFISYDDAY SPPKAVEQVR KLVESDEVLA VFNPLGTPSN
TAVQKYLNAK KVPQLFVATG ATKWNDSKNF PWTIGWQPSY QSEAQIYAKY LLKEKPDAKI
GILYQNDDFG KDYLKGTKDG LGAKAASMII AEESYEISAP TIDSNVVKLK SANPDVVLVY
TTPKFAAQTI KKIAELSWKP LVILTNVSAS VGSVMQPAGF ENAQGVLSAN YAKDPTDQQW
DSDPKFKKWH AFVEKYMPGS NKNDSNMVYG YGAAQTLHKV LEMCGDDLTR ANLMKQAASL
KDFEPDTLLP GVKINTSATD FAPISQLQMM RFKGDRWELF GEIISGDITQ
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