| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1730 |
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| Symbol | |
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| ID | 3908255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1973001 |
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| End bp | 1975607 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883624 |
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| Product | hypothetical protein |
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| Protein accession | YP_485349 |
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| Protein GI | 86748853 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.047499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAAA GTGCCATCGT TTCCATTGTG AAAGCCAGCA CCCGTTTTGC GTCTTTTACT
GTGCTGATCG GGGTATTGCT CGCGATCGCC AGCGGCTTCT ATACTTACCA GAACTTCGGG
ATCAACACCG ATATCAATCA TTTGATCTCG TCCGACCTGG ATTGGCGCAA GCGCGATATC
GCCTTCGAGA AGGCGTTCGA TCAGGAAAGA TTGATCCTGG CGGTGGTCGA GGCTCCGACG
CCGGAATTTG CCAACGCTGC GACGGCCGCG CTGACAGAGA AATTATCAAG CAATCACAAG
AACTTCGACT CGGTTAAACG ACTCGGCGGG GGCGAATTTT TCGACCGGCA CGGGTTGCTG
TTCCTGCCGA CCGACGAGGT CGCCAAGGTG ACCGGCCAGT TCCAGTCGGC AGTTCCGCTG
ATCGAGATTA TGGCCGGCGA CCCCAGCATT CGGGGCCTCA CGGCCGCGCT GGAGACCGGC
CTGCTCGGCG TGACCCGCGG GCAGATTACG CTCGACGGTG CCGCGGCACC GTTCAACACC
ATCAGTCAGA CCGTCGAGGA CGTCCTCGCC AAGCGCGCGG CGTTCTTCTC CTGGCGCGGT
CTGAGCAGCC CCGAGCCGCT GACCGACGGT GACAAGCGGG CGTTCATCGA GGTCAAGCCG
ATCCTCGATT TCACCGAACT CGAGCCGGGC CGGGCCGCTA CCGACGCGAT CCGTGCAGCG
GCGACCGAGC TCAATCTGGA GCAGCAATTC GGCGCCCGGG TCCGGCTGAC GGGCCCGGTG
CCGATTGCCA ACGAGGAATT CTCCACGGTC AAGGAAGGCG CCATCGTCAA CGGCATCGGC
ACCGTGGTGG TGGTGCTGAT CATCCTGTGG ATGGCGCTGC ACTCCTCGAA GATCATCTTC
GCCGTCGCCG CCAACCTGTT CATCGGTCTG GCGATCACCA CGGCGGTCGG GCTGATGCTG
GTCGACACGC TCAATCTGCT GTCGATCGCC TTCGCGGTTC TGTTCGTCGG TCTCGGCGTC
GATTTCGGCA TCCAGTTCAG CGTTCGCTAC AGATCCGAAC GCCACAAGAC CAACGACCTC
AACAAGGCGC TGATCCAGGC GGCGGAGTAT TCCGCGGTGC CGCTGTCGCT GGCGGCGATG
TCGACCACCG CCGGTTTCCT GTCGTTTCTG CCGACCTCCT ACAAAGGCAT TTCCGAACTC
GGCGAGATCG CCGGCGCCGG CATGGCGATC GCGTTCATCT CCAGCATCAC GGTGCTGCCG
GCGCTGATCA AACTGCTGAA CCCGGCCGGC GAGAAAGAGC CGCTGGGCTA CGCGTTTCTG
GCGCCGCTCG ATCGCTTCCT GGAGGTTCAT CGCGTCGGCG TGATCGCCGG CACGATCGGT
GTCGCATTGG CTGGTCTGCC GCTGCTCTAC TACATGCATT TCGACTTCAA CCCGATCAAT
CTGCGCAGCC CGAAGGTGGA GTCGATCGCG ACCTTCCTCG ACCTGCGCAA GGATCCGAAC
ACCGGCGCCA ACGCCATCAA CGTGCTGGCG CCATCCGAAC AGGCCGCCAA GGACATCCAG
GCCAAGCTGG CGAAGGTGCC CGAAGTGTCG CGGACGCTGT CGCTCGACAC CTTCGTGCCG
GCGGATCAGC CAGCGAAGCT GAAGCTGATC CAGGCCGGCG CCAAGGTGCT GGAGCCGGCG
CTGAACCCGG AGCAGATCGA CCCTCCGCCG ACCGATCAGG AAAACATCGA GGCGCTGAAC
AGCTCGGTGG CGGCGCTGCG CAAGACCGCC GGCGACGCCA CCGGTCCCGG CGCCGAGGCT
GCTCGCCGCC TCGCCACGGC GCTGGGGGCG CTCGCCAAGG TCGACCAGGC GACCCGCGAC
CAGGCTCAGG CGGTATTCGT GACGCCGCTG AAGCTCGCCT TCAATCAGCT CCGCAGCATG
TTGCAGGCGG AGCCGGTGAC GCTGGACAAC CTGCCCCAGG ACATCGTGTC CTCCTGGAAG
GCCAAGGACG GTCAGATCCG CATCGAAGTG CTGCCGAACG GCGATCCGAA CGACAACGAG
ACGCTGCGCA AATTCGCAGC GTCGGTGCTG CAGGCCGAGC CGAATGCCCT CGGCGGGCCG
GTGTCGATCC TGAAGTCCGG CGACACCATC GTTGCCTCCT TCATCCAGGC CGGCCTGTGG
GCGCTGCTGT CGATCTCGTT GCTGCTGTGG CTCACGCTGC GGCGGATCTC GGACGTGCTG
CTGACGCTGG TTCCGCTGCT GGTCGCCGGC GCCGTGACCC TGGAAATCTG CGTGCTGATC
GGCTTGCCGC TCAATTTCGC CAATATCGTC GCGCTGCCGC TGCTGCTCGG CATCGGCGTC
GCATTCAAGA TCTACTATGT GGTGGCGTGG CGCGCGGGAC GCACCAATCT GCTGCAATCG
GCGCTGACGC GGGCGATCTT CTTCAGCGCG CTGACGACCG CGACGGCGTT CGGCAGCCTT
TGGCTGTCGA GCCACCCCGG CACCGCCAGC ATGGGCAAGC TGCTGGCGCT GTCGCTGCTG
ACCACGCTGG GCGCGGTGCT GCTGTTCCAG CCGGCGCTGA TGGGCAAGCC GCGCCATATC
GACGAGACCG GCGATACCGA CCTCTGA
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| Protein sequence | MLKSAIVSIV KASTRFASFT VLIGVLLAIA SGFYTYQNFG INTDINHLIS SDLDWRKRDI
AFEKAFDQER LILAVVEAPT PEFANAATAA LTEKLSSNHK NFDSVKRLGG GEFFDRHGLL
FLPTDEVAKV TGQFQSAVPL IEIMAGDPSI RGLTAALETG LLGVTRGQIT LDGAAAPFNT
ISQTVEDVLA KRAAFFSWRG LSSPEPLTDG DKRAFIEVKP ILDFTELEPG RAATDAIRAA
ATELNLEQQF GARVRLTGPV PIANEEFSTV KEGAIVNGIG TVVVVLIILW MALHSSKIIF
AVAANLFIGL AITTAVGLML VDTLNLLSIA FAVLFVGLGV DFGIQFSVRY RSERHKTNDL
NKALIQAAEY SAVPLSLAAM STTAGFLSFL PTSYKGISEL GEIAGAGMAI AFISSITVLP
ALIKLLNPAG EKEPLGYAFL APLDRFLEVH RVGVIAGTIG VALAGLPLLY YMHFDFNPIN
LRSPKVESIA TFLDLRKDPN TGANAINVLA PSEQAAKDIQ AKLAKVPEVS RTLSLDTFVP
ADQPAKLKLI QAGAKVLEPA LNPEQIDPPP TDQENIEALN SSVAALRKTA GDATGPGAEA
ARRLATALGA LAKVDQATRD QAQAVFVTPL KLAFNQLRSM LQAEPVTLDN LPQDIVSSWK
AKDGQIRIEV LPNGDPNDNE TLRKFAASVL QAEPNALGGP VSILKSGDTI VASFIQAGLW
ALLSISLLLW LTLRRISDVL LTLVPLLVAG AVTLEICVLI GLPLNFANIV ALPLLLGIGV
AFKIYYVVAW RAGRTNLLQS ALTRAIFFSA LTTATAFGSL WLSSHPGTAS MGKLLALSLL
TTLGAVLLFQ PALMGKPRHI DETGDTDL
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