| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1725 |
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| Symbol | |
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| ID | 3908250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1966273 |
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| End bp | 1967529 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883619 |
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| Product | amine oxidase |
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| Protein accession | YP_485344 |
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| Protein GI | 86748848 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.299467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.079846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAA CCGTTCACAT CATCGGTGCT GGAATCTCCG GTCTCGCGGC CGCGACGAAG
CTCGCGCGCG CCGGGCTGAC CGTCCACGTC CACGAAGCGA TGCAGCAGGC CGGCGGCCGT
TGCCGCTCGT ATTTCGACGC CCAGACCGAT CTGGTCATCG ACAACGGCAA TCATCTGCTG
CTGTCGGGCA ACCACGCCGC GCGCGACTAT GCGCGGTCGA TCGGCACCGA GGCCGGGCTG
GTCGGGCCAG AACGCGCCGA GTTCGACTTC ATGGATGTGA GATCCAACGC GCGCTGGAAG
CTCGACCTTG GCAGCGGCCG GCTGCCGTTC TGGCTGTTCG ATGCCGGTCG CCGGGTGCCC
GACACCGCGA TCCGGGATTA TCTGGCGCTG GCGCCGCTGC TGTGGGCGCC GACCAGCAAG
CTGATCGGCG ATACCATCCC CTGCCGCGGC CCGCTGTATG ACCGTTTGGT GCAGCCGCTG
CTGCTGGCGG CGCTCAATGT CGACCCGCCC GAAGGATCGG CCGGTCTCGC CGGCGCGATC
GTGCGCGAGA CGCTGCTCGC CGGTGGCAAG GCCTGCCGTC CGCTGATCGC CCGCGACGGT
CTCAGCGCGG TGCTGGTCGA GCCGGCCGTC GAATTGCTGG CGCGCAGCGG TCCGGGGGTG
CGGTTCGGTC ACGAATTGCG GACGCTGACG CCATCCGGCG ACCGGGTCGC TGGTCTGAAC
TTCGGCGGCG AAGACGTCGT CACGGTCGGG CCGGAGGACG CGGTGGTGCT GGCGGTGCCG
CCACGGCCGG CGGCTTCGCT GCTGCCGGGG CTGAAGACGC CGCAGAATTA TCGGGCGATC
GTCAACGCCC ATTTCAATTA CGCGCCGCCG GCGGGGATGC CGGCGCTGAC TGGGGTGATC
GGCGGGGTGG TGGAGTGGCT GTTCGCCTTC CCGAACCGGC TGTCGGTGAC CATCAGCAAT
GCCGACCGGC TGGTCGACGC CCCGCGCGAC CAGCTCGCGG CCGCGATCTG GGGCGAGATC
TGTCAGGTGG CCGGTATTTC GGCGAATTTA CCGCCGTGGC AAATTGTCCG CGAGCGCCGG
GCGACCTTCG AGGCTACGCC GGCACAACAT GCCCTGCGTC CGGGGCCGGT CACTCTGTGG
AAAAACCTGT TCCTCGCAGG CGATTGGACT GATACGGGGT TGCCGGCCAC CATCGAGGGG
TCGGTGCGGT CCGGGAACCG GGCCGCCGAC CTGGTGCTGG CGCTGGGTCA GGCCTGA
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| Protein sequence | MPKTVHIIGA GISGLAAATK LARAGLTVHV HEAMQQAGGR CRSYFDAQTD LVIDNGNHLL
LSGNHAARDY ARSIGTEAGL VGPERAEFDF MDVRSNARWK LDLGSGRLPF WLFDAGRRVP
DTAIRDYLAL APLLWAPTSK LIGDTIPCRG PLYDRLVQPL LLAALNVDPP EGSAGLAGAI
VRETLLAGGK ACRPLIARDG LSAVLVEPAV ELLARSGPGV RFGHELRTLT PSGDRVAGLN
FGGEDVVTVG PEDAVVLAVP PRPAASLLPG LKTPQNYRAI VNAHFNYAPP AGMPALTGVI
GGVVEWLFAF PNRLSVTISN ADRLVDAPRD QLAAAIWGEI CQVAGISANL PPWQIVRERR
ATFEATPAQH ALRPGPVTLW KNLFLAGDWT DTGLPATIEG SVRSGNRAAD LVLALGQA
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