Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1714 |
Symbol | |
ID | 3908239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1953106 |
End bp | 1953984 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883608 |
Product | transglutaminase-like |
Protein accession | YP_485333 |
Protein GI | 86748837 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.242614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.551009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCTACG ACATCCGCCA CGTCACGTCC TACAGCTACG GCAGTCCGGT CAGCTACGCG CGCTGTTCCC TGCGGCTGAA GCCGATGAGC GACGCCAGCC AGAAACTGAT CTCGCACAGT ATCGAGATCA AGCCGAAGCC GGCGACGCGC ACGACACGGG TCGATTTCTT CGGCATTCCG ACCGACAGCA TCGTGATCGA GACGCCGCAC AAGGTGTTGC GGATCGACAG CCGCTCCCGC GTCGAAGTCG ATCGCAAGCC CCCGGCACGC GACAGCGGCA GCGCGGCGTG GGAAAGCGTG CGCGAGGCGG CGCTGGATTG CGCCAGCCTC GATGCGGACG CGCCGGTCGG CTACGTGTTT CCGAGCTCGC TGGTTCCGAT CCAGCACGCC GTCACCCGCT ACGCGGCGAA GAGTTTTGCG CCGGCGCGCG GCATTCTGGC CGCAACTGCC GATCTGATGC GCCGCATTCA CAGCGACTTC AAATACGACC CGAAGGCGAC GGTGATCTCG ACGCCGCTCG CGGAAGTTTT CGAGAAGCGC CACGGCGTCT GCCAGGATTT CGCACACGTG ATGATCGCTG GCCTGCGCGG GCTCGGCGTG CCGGCCGCCT ATGTCAGTGG TTATCTGCGG ACCTATCCGC CGGAAGGCCA GCCGCGGCTG CAAGGCGCCG ACGCCACCCA CGCCTGGGTC ACAGTGTGGT GCGGCAACGA GACCGGCTGG GTCGGGTTCG ATCCGACCAA TGATCTGCTG ATCGGCAACG ACCATATCGT GCTCGCGGTC GGCCGCGATT TCTCCGACGT CTCGCCGGTC GACGGCGTGA TCGTCGGCTC GCGCAAGCAG AAATTGTCGG TCGCGGTCGA CGTCATTCCG ATCGAGTAG
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Protein sequence | MIYDIRHVTS YSYGSPVSYA RCSLRLKPMS DASQKLISHS IEIKPKPATR TTRVDFFGIP TDSIVIETPH KVLRIDSRSR VEVDRKPPAR DSGSAAWESV REAALDCASL DADAPVGYVF PSSLVPIQHA VTRYAAKSFA PARGILAATA DLMRRIHSDF KYDPKATVIS TPLAEVFEKR HGVCQDFAHV MIAGLRGLGV PAAYVSGYLR TYPPEGQPRL QGADATHAWV TVWCGNETGW VGFDPTNDLL IGNDHIVLAV GRDFSDVSPV DGVIVGSRKQ KLSVAVDVIP IE
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