Gene RPB_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1713 
Symbol 
ID3908238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1950608 
End bp1953109 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content70% 
IMG OID637883607 
Producthypothetical protein 
Protein accessionYP_485332 
Protein GI86748836 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.788939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.45404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGAGC AGAGCAGTCA GTCGAAACGC GTCCGTCCGC GTGACCGGAA GGTCGCGCAA 
TGGACTCGCG ACTATGCGCG ACTGCCCGGC ATTCCCGACG AATTCATCGG CGACGACGGC
GCGCCCCGCG CGGTGTGGAG CCGTTACTTC GACGCCTTCG CGGGCCTTGC GCCCGACGAG
ATCGAGCGTC GATTCCGCGC TGCAGACCGC CATCTGCGCG ACGCCGGCGT CACCTATCGC
GCGCCGGGCG ACGCCACCGA GCGCGCCTGG CCGCTGAGTC ACGTTCCGCT GCTGATCGAC
GATGCCGAAT GGCAGCAGAT CGCGGCCGGG ATCGCGCAGC GTGCGACGCT GCTCGAACAC
GTGTTGCAGG ATCTCTACGG CGACGGGCGA TTGATCGCGG AGGGGGCGGT GCCGGCTGCG
GCGATTGCCG GCAGCCCGGA ATATGTGCGC GCGATCTGCG GTGTGAAGCC GCCGGGCGGC
CGCTATCTGA ATCTCTACGC GGCCGATATC GGCCGCGGTC CGGACGGCCG CTGGTGGGTG
CTCGGCGATC GCACGCAAGC GCCGTCGGGC ACCGGTTACG CGCTGGAAAA CCGGCTGGTG
CTGTCGCGCG CCTTCACCGA TCTCTACAAG TCGATGAATG TCGAACGCGT CGCGCCGTTC
TTCGAGGCGT TCCGCGACAG CCTGCGCGCC AGTGCGGACC GCGACGAGCC GCGGATCGGC
GTGCTGACGC CGGGGCCGTT CAGCGAGACC TATTTCGAGC ACGCCACGCT GGCGCGCTAT
CTCGGCTTCC TGCTGGTCGA AGGCGACGAC CTCGCGGTCT CCGGCGATCG TGTCCACATC
CGCACCGTGG CCGGGTTGAA GCGGCTCGAC GTGCTGCTGC GCCGGGTCGA TTCCAATTCG
CTCGATCCGC TCGAACTCGA CGCCTCGTCG CAACTCGGCG TGCCGGGACT GATCGACGTG
CTGCGCAAGA GCGGCGTCGT CGTCGCCAAC ATGCCCGGCG CCGGCGTGAT CGAGGCGCGG
TCGCTGCTCG GATTTCTGCC GAGTCTGAGC CGCCGCCTGC TCGACCAAGA TCTGGCGATG
CCGCACATCG CCACCTGGTG GTGCGGTCAG GCGCGGGCCC GGGACGAGGT GCTGTCGCGG
CTCGACGACT TCGTCATCGA AGGGGCCTAT GGTCCGACCG TGCCGGGCTT CTCCCACAGC
GGCGCCGTGC TGCCCGCGGA ATTGCCGCCG GCGGTGCGCG ACCGGCTCCG CGATGCGATC
GCCACCCGCG GCATCGACTA CGTGGCGCAG GAACAGGTGC GGCTGTCGAC CACGCCGGTA
TGGGACGACG GCAAGCTGGC GCCGCGGCCG TTCGTGCTGC GGGTGTTCGC CGCGGCGACC
GAACACGGCT GGACGGTCAT GCCCGGCGGC TTCTGCCGGA TTGCCGAGCG GCTCGACTCG
CGTGCGGTGT CGATGGGCGA GGGCGCCCGG GCCGCCGACG TGTGGGTGGT GTCCGATCAT
GCGGTGTCGA CGGCGTCGCT GCTGCCCGCT GTCGACAACG TCCGGATCCG GCGGATCACC
GGCCTGCTGC CGAGCCGCGC CGCCGACAAT CTGTTCTGGC TCGGTCGCTA TCTCGAGCGC
GCGGAAGCGA CGCTGCGGTT GGTGCGCGCG CTCAGCGCGC CGCAGCGCGA CCCCGGCAAG
GGGCCGCTGC ATCACGCCAT CGAACGCATT CAGCGGCTGC TGATCAGTTG GGGCGCGACC
TCGCTCGGTG CGCGCGCGCA GACCGCGAAG ATCGCCGCCG ACGCGCTGCA GAGCGAGGAG
CAGTTCGGTT CGGCGCTGTC CCTGATCCGC GCCGCGCAAC GCAACGCATC GTCGTTGCGC
GAGCGGCTGT CGCCCGATGC CTGGCAGGTG ATCACGCAGA CCGAGGCGCG GCTGGCGAAG
CCGGCCGAGG ACGAGGATGC GGTGACGGGG CTGGCGGAAA TCACCTTGCA GGAACTGGCG
AGCTTCTCCG GCCTGTCGCA GGAAAACATG AACCGCGCCG CCGGCTGGCG GTTCCTTCGG
ATGGGTCGCC GGATCGAGCG GGCCGTCAAT ACGGCACGGT TCGCGCGGCA GTTCGCCCCC
GACGACGCCA GCGCCGAAGA CCTCGACGTG TTGCTGACGT TGGTCGATTG CCAGATCACC
TACCGCTCGC GCTATCTGCT GGCGCCGTTG CTGGCACCGG TGCGCGATCT CGCGGTATTG
GATCCGTACA ATCCGCGCTC GGTGGCGTTT CAGGTCGAGG AACTGAACGA GCACATCGCC
AGCCTGCCGT CGCTGAAGGA GGGCGGGCTG ATCGAGCGGC CGCAGCGTCT CGCGGTGGCG
CTGCAGGCGA CGCTGACCAC GGCCGAGGCG TCCGCGCTCG ACGCGCGGTG GCTGTTCGCG
GTGGAGCAGG ATCTGCTGTC GCTGGCCGAT GCGATCGGGG CGCACTACTT CCCGCACGGC
GCCAGCGCGA CGCGCCCGGA AAAGCTGACG GGGTTGGCTT GA
 
Protein sequence
MAEQSSQSKR VRPRDRKVAQ WTRDYARLPG IPDEFIGDDG APRAVWSRYF DAFAGLAPDE 
IERRFRAADR HLRDAGVTYR APGDATERAW PLSHVPLLID DAEWQQIAAG IAQRATLLEH
VLQDLYGDGR LIAEGAVPAA AIAGSPEYVR AICGVKPPGG RYLNLYAADI GRGPDGRWWV
LGDRTQAPSG TGYALENRLV LSRAFTDLYK SMNVERVAPF FEAFRDSLRA SADRDEPRIG
VLTPGPFSET YFEHATLARY LGFLLVEGDD LAVSGDRVHI RTVAGLKRLD VLLRRVDSNS
LDPLELDASS QLGVPGLIDV LRKSGVVVAN MPGAGVIEAR SLLGFLPSLS RRLLDQDLAM
PHIATWWCGQ ARARDEVLSR LDDFVIEGAY GPTVPGFSHS GAVLPAELPP AVRDRLRDAI
ATRGIDYVAQ EQVRLSTTPV WDDGKLAPRP FVLRVFAAAT EHGWTVMPGG FCRIAERLDS
RAVSMGEGAR AADVWVVSDH AVSTASLLPA VDNVRIRRIT GLLPSRAADN LFWLGRYLER
AEATLRLVRA LSAPQRDPGK GPLHHAIERI QRLLISWGAT SLGARAQTAK IAADALQSEE
QFGSALSLIR AAQRNASSLR ERLSPDAWQV ITQTEARLAK PAEDEDAVTG LAEITLQELA
SFSGLSQENM NRAAGWRFLR MGRRIERAVN TARFARQFAP DDASAEDLDV LLTLVDCQIT
YRSRYLLAPL LAPVRDLAVL DPYNPRSVAF QVEELNEHIA SLPSLKEGGL IERPQRLAVA
LQATLTTAEA SALDARWLFA VEQDLLSLAD AIGAHYFPHG ASATRPEKLT GLA