Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1713 |
Symbol | |
ID | 3908238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1950608 |
End bp | 1953109 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637883607 |
Product | hypothetical protein |
Protein accession | YP_485332 |
Protein GI | 86748836 |
COG category | [S] Function unknown |
COG ID | [COG2307] Uncharacterized protein conserved in bacteria [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.788939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.45404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGAGC AGAGCAGTCA GTCGAAACGC GTCCGTCCGC GTGACCGGAA GGTCGCGCAA TGGACTCGCG ACTATGCGCG ACTGCCCGGC ATTCCCGACG AATTCATCGG CGACGACGGC GCGCCCCGCG CGGTGTGGAG CCGTTACTTC GACGCCTTCG CGGGCCTTGC GCCCGACGAG ATCGAGCGTC GATTCCGCGC TGCAGACCGC CATCTGCGCG ACGCCGGCGT CACCTATCGC GCGCCGGGCG ACGCCACCGA GCGCGCCTGG CCGCTGAGTC ACGTTCCGCT GCTGATCGAC GATGCCGAAT GGCAGCAGAT CGCGGCCGGG ATCGCGCAGC GTGCGACGCT GCTCGAACAC GTGTTGCAGG ATCTCTACGG CGACGGGCGA TTGATCGCGG AGGGGGCGGT GCCGGCTGCG GCGATTGCCG GCAGCCCGGA ATATGTGCGC GCGATCTGCG GTGTGAAGCC GCCGGGCGGC CGCTATCTGA ATCTCTACGC GGCCGATATC GGCCGCGGTC CGGACGGCCG CTGGTGGGTG CTCGGCGATC GCACGCAAGC GCCGTCGGGC ACCGGTTACG CGCTGGAAAA CCGGCTGGTG CTGTCGCGCG CCTTCACCGA TCTCTACAAG TCGATGAATG TCGAACGCGT CGCGCCGTTC TTCGAGGCGT TCCGCGACAG CCTGCGCGCC AGTGCGGACC GCGACGAGCC GCGGATCGGC GTGCTGACGC CGGGGCCGTT CAGCGAGACC TATTTCGAGC ACGCCACGCT GGCGCGCTAT CTCGGCTTCC TGCTGGTCGA AGGCGACGAC CTCGCGGTCT CCGGCGATCG TGTCCACATC CGCACCGTGG CCGGGTTGAA GCGGCTCGAC GTGCTGCTGC GCCGGGTCGA TTCCAATTCG CTCGATCCGC TCGAACTCGA CGCCTCGTCG CAACTCGGCG TGCCGGGACT GATCGACGTG CTGCGCAAGA GCGGCGTCGT CGTCGCCAAC ATGCCCGGCG CCGGCGTGAT CGAGGCGCGG TCGCTGCTCG GATTTCTGCC GAGTCTGAGC CGCCGCCTGC TCGACCAAGA TCTGGCGATG CCGCACATCG CCACCTGGTG GTGCGGTCAG GCGCGGGCCC GGGACGAGGT GCTGTCGCGG CTCGACGACT TCGTCATCGA AGGGGCCTAT GGTCCGACCG TGCCGGGCTT CTCCCACAGC GGCGCCGTGC TGCCCGCGGA ATTGCCGCCG GCGGTGCGCG ACCGGCTCCG CGATGCGATC GCCACCCGCG GCATCGACTA CGTGGCGCAG GAACAGGTGC GGCTGTCGAC CACGCCGGTA TGGGACGACG GCAAGCTGGC GCCGCGGCCG TTCGTGCTGC GGGTGTTCGC CGCGGCGACC GAACACGGCT GGACGGTCAT GCCCGGCGGC TTCTGCCGGA TTGCCGAGCG GCTCGACTCG CGTGCGGTGT CGATGGGCGA GGGCGCCCGG GCCGCCGACG TGTGGGTGGT GTCCGATCAT GCGGTGTCGA CGGCGTCGCT GCTGCCCGCT GTCGACAACG TCCGGATCCG GCGGATCACC GGCCTGCTGC CGAGCCGCGC CGCCGACAAT CTGTTCTGGC TCGGTCGCTA TCTCGAGCGC GCGGAAGCGA CGCTGCGGTT GGTGCGCGCG CTCAGCGCGC CGCAGCGCGA CCCCGGCAAG GGGCCGCTGC ATCACGCCAT CGAACGCATT CAGCGGCTGC TGATCAGTTG GGGCGCGACC TCGCTCGGTG CGCGCGCGCA GACCGCGAAG ATCGCCGCCG ACGCGCTGCA GAGCGAGGAG CAGTTCGGTT CGGCGCTGTC CCTGATCCGC GCCGCGCAAC GCAACGCATC GTCGTTGCGC GAGCGGCTGT CGCCCGATGC CTGGCAGGTG ATCACGCAGA CCGAGGCGCG GCTGGCGAAG CCGGCCGAGG ACGAGGATGC GGTGACGGGG CTGGCGGAAA TCACCTTGCA GGAACTGGCG AGCTTCTCCG GCCTGTCGCA GGAAAACATG AACCGCGCCG CCGGCTGGCG GTTCCTTCGG ATGGGTCGCC GGATCGAGCG GGCCGTCAAT ACGGCACGGT TCGCGCGGCA GTTCGCCCCC GACGACGCCA GCGCCGAAGA CCTCGACGTG TTGCTGACGT TGGTCGATTG CCAGATCACC TACCGCTCGC GCTATCTGCT GGCGCCGTTG CTGGCACCGG TGCGCGATCT CGCGGTATTG GATCCGTACA ATCCGCGCTC GGTGGCGTTT CAGGTCGAGG AACTGAACGA GCACATCGCC AGCCTGCCGT CGCTGAAGGA GGGCGGGCTG ATCGAGCGGC CGCAGCGTCT CGCGGTGGCG CTGCAGGCGA CGCTGACCAC GGCCGAGGCG TCCGCGCTCG ACGCGCGGTG GCTGTTCGCG GTGGAGCAGG ATCTGCTGTC GCTGGCCGAT GCGATCGGGG CGCACTACTT CCCGCACGGC GCCAGCGCGA CGCGCCCGGA AAAGCTGACG GGGTTGGCTT GA
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Protein sequence | MAEQSSQSKR VRPRDRKVAQ WTRDYARLPG IPDEFIGDDG APRAVWSRYF DAFAGLAPDE IERRFRAADR HLRDAGVTYR APGDATERAW PLSHVPLLID DAEWQQIAAG IAQRATLLEH VLQDLYGDGR LIAEGAVPAA AIAGSPEYVR AICGVKPPGG RYLNLYAADI GRGPDGRWWV LGDRTQAPSG TGYALENRLV LSRAFTDLYK SMNVERVAPF FEAFRDSLRA SADRDEPRIG VLTPGPFSET YFEHATLARY LGFLLVEGDD LAVSGDRVHI RTVAGLKRLD VLLRRVDSNS LDPLELDASS QLGVPGLIDV LRKSGVVVAN MPGAGVIEAR SLLGFLPSLS RRLLDQDLAM PHIATWWCGQ ARARDEVLSR LDDFVIEGAY GPTVPGFSHS GAVLPAELPP AVRDRLRDAI ATRGIDYVAQ EQVRLSTTPV WDDGKLAPRP FVLRVFAAAT EHGWTVMPGG FCRIAERLDS RAVSMGEGAR AADVWVVSDH AVSTASLLPA VDNVRIRRIT GLLPSRAADN LFWLGRYLER AEATLRLVRA LSAPQRDPGK GPLHHAIERI QRLLISWGAT SLGARAQTAK IAADALQSEE QFGSALSLIR AAQRNASSLR ERLSPDAWQV ITQTEARLAK PAEDEDAVTG LAEITLQELA SFSGLSQENM NRAAGWRFLR MGRRIERAVN TARFARQFAP DDASAEDLDV LLTLVDCQIT YRSRYLLAPL LAPVRDLAVL DPYNPRSVAF QVEELNEHIA SLPSLKEGGL IERPQRLAVA LQATLTTAEA SALDARWLFA VEQDLLSLAD AIGAHYFPHG ASATRPEKLT GLA
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