| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1711 |
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| Symbol | |
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| ID | 3908236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1946174 |
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| End bp | 1946950 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883605 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_485330 |
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| Protein GI | 86748834 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.343483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA AGGTGAAACA GCTCTGGGCC TCCGGCAAGG CGGTGGTGAA TGCGTGGCTG
GCGATCCCGT CCGGCTTCTC GGCCGAGGTG ATGGCGCAAT GCGGCTTCGA CAGCGTGACC
GTCGACATCC AGCACGGCGT GCAGGACTAT CAATCGATGG TGGCCTGTTT TCAGGCGATG
AACGGCCATC CGGTGACGCC GATGGTGCGG GTGCCTTGGA ACGAGCCGGG CATCATCGGC
AAGGTGCTGG ACGGCGGCGC CTATGGGGTC ATCTGCCCGA TGGTGAATAC CAAGGAGGAG
GCCGAGGCAT TCGTGCAATC TTGCAAATAT CCGCCGCGCG GCACCCGTAG TAACGGGCCG
ATCCGCGCCG GGATGTATGG CGCCGGTGGC AGCTATCAGG ACACGGCCAA CGTCGAGACG
CTGTGCATCC CGATGATCGA GACCCGCACT GCGGTCGAGA ACATGGAGGC GATCCTCGAC
GTCGAAGGCA TCGCCGGCGT CTATGTCGGG CCGAGCGACC TCGGCTATTC CTACGGGCTG
GTGCCGAAGC TCGACCGCGA GGAGCCGGAG ATCCTGAAGA TCTACGACAA ATTGCTGAAG
GAATGCGACA AGCGCGGCAT CTACCCGGGC ATCCATTGTT CGGGCCCGGC CGGCGCCGCC
AAGAACATCG CGATGGGCTT CAAGCTGGTC ACGCTGCTCA ACGACAGCGG CATCATGGCG
ACCGCCGCGA AGCAATGGGT CGGCGAGACG CGGCAGAATT CGGGCGGCAA GGCGTAG
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| Protein sequence | MANKVKQLWA SGKAVVNAWL AIPSGFSAEV MAQCGFDSVT VDIQHGVQDY QSMVACFQAM
NGHPVTPMVR VPWNEPGIIG KVLDGGAYGV ICPMVNTKEE AEAFVQSCKY PPRGTRSNGP
IRAGMYGAGG SYQDTANVET LCIPMIETRT AVENMEAILD VEGIAGVYVG PSDLGYSYGL
VPKLDREEPE ILKIYDKLLK ECDKRGIYPG IHCSGPAGAA KNIAMGFKLV TLLNDSGIMA
TAAKQWVGET RQNSGGKA
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