| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1710 |
|---|
| Symbol | |
|---|
| ID | 3908235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1944970 |
|---|
| End bp | 1946055 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883604 |
|---|
| Product | malate/L-lactate dehydrogenase |
|---|
| Protein accession | YP_485329 |
|---|
| Protein GI | 86748833 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.376273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAA TCAAGGTCGA CCGACTGATC GGTTTCGTCG CCGAAGTGTT CGAGCGCGCC
GGCTCCTCGA AAGAGGAGGC GCGCCGGATC GGCAGCTATC TCACCACCGC CAATCTCACC
GGCCACGACA GCCACGGCGT GATCCGCGTG CCTGTCTATA TCCGCTGGCG CAATGCCGGC
GCTGTGCATC CGGATCAGGT CGTCGGCGTG CCGGTCGACC TGCCCTCGCT GGCCGTGGTC
GACGGCAAGT ACGGCTACGG CCAGACCGTC GGGCCGCAGG CGGTGCGGAT CGGCATCGAC
AAGTGCAAGG CGCAGGGGCT TTCGGCGGTC GGCCTGAAGA ACGCCGGCCA TATCGGCCGG
ATCGGCGACT GGGCGGAGAT GGCGGCGGCC GAGGGGCTGG TGTCGATCCA TTTCGTCACT
GCGGCTGGTT CGATCCTGGT CGCGCCCTAT GGCGGCGTCG AGCGACGACT GTCGACCGCG
CCTTATTGCG TCGGCGTGCC GCGGCCGGGC GCTCCGCCGG TGGTGCTCGA TTTTGCGACC
TCGATCGTCG CCGAGGGCAA GGTGCTGGTC GCGGCGCGCG GCGGCAAGCA ACTGCCGAAG
GGCGCGCTGA TCAATCCCGA CGGCACCTTC AGCGAAGACC CCGCGACGCT GTATGGCCCG
TTCGAGAAGG ACGGTCCAAT CAATCACGTC AACGGCGCCG GAGCGATCCG TGCGTTCGGC
GAGCACAAGG GCTCGGGGCT GGCGCTGATC TGCGAATTGC TCGGCGGCGC TTTGAGCGGC
AACGGCGCCA CAGGGCCGGA CCGGCCGTTC GCCAACGGCA TGTTCTCGAT CTATGTCGAT
CCGCAGCGGA TCGATCCCGA GCACGTGTTC GACGCCGAGG TCACGCGCTA CATCGATTAC
TTCAGGAGTG CGAAGACCAC AGCCGGCACC GAAGCGGTGT TGATCCCCGG CGATCCGGAA
TTGCGCACCC GTGCCGAGCG CACCGCCAAC GGCGTGCCCT TGTCCGACGA CACCTGGGCC
GCCATCGTCG CCACCGCGCG CGAAGTCGGC GTCGCCGAGG CTGCGATTCA GGCGGCCGTG
GCGTGA
|
|---|
| Protein sequence | MVTIKVDRLI GFVAEVFERA GSSKEEARRI GSYLTTANLT GHDSHGVIRV PVYIRWRNAG
AVHPDQVVGV PVDLPSLAVV DGKYGYGQTV GPQAVRIGID KCKAQGLSAV GLKNAGHIGR
IGDWAEMAAA EGLVSIHFVT AAGSILVAPY GGVERRLSTA PYCVGVPRPG APPVVLDFAT
SIVAEGKVLV AARGGKQLPK GALINPDGTF SEDPATLYGP FEKDGPINHV NGAGAIRAFG
EHKGSGLALI CELLGGALSG NGATGPDRPF ANGMFSIYVD PQRIDPEHVF DAEVTRYIDY
FRSAKTTAGT EAVLIPGDPE LRTRAERTAN GVPLSDDTWA AIVATAREVG VAEAAIQAAV
A
|
|---|
| |