| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1703 |
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| Symbol | |
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| ID | 3908228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1937547 |
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| End bp | 1939223 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883597 |
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| Product | hypothetical protein |
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| Protein accession | YP_485322 |
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| Protein GI | 86748826 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.603628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGT CGACGAAGCC GACTAGCTCC AATCCAACAA CGAGACCCAA AATGAGCATC
ATGACCGGCG GCGAAGCGAT CGTGCAGACC CTCGTCGCGC ACGGCGTCGA CACCGTGTTC
GGCCTGCCCG GCGCGCAGAT CTACGGGTTG TTCGACGGCT TCGCAAAGGC GCAACTCCGC
GTCGTCGGTG CGCGCCATGA GCAGGCCTGC GGCTACATGG CGTTCGGCTA TGCCCGCGCC
TCGGGCCGCC CCGGCGTGTT CAGCGTCGTG CCCGGCCCCG GCGTGCTGAA TGCCGGCGCG
GCGCTGCTCA CCGCCTTCGG CTGCAACGAG CCGGTGCTGT GCCTCACCGG TCAGGTGCCG
AGCGCCTATC TCGGCAAGGG CCGTGGTCAC CTGCATGAGA TGCCGGATCA GCTCGCGACG
TTGCGCAGCT TCATCAAATG GGCCGAGCGC ATGGAGTATC CCGGCAACGC GCCGGCGCTG
GTCGCGCGCG CGTTCCAGGA GATGATGAGC GGCCGGCGCG GCCCGGTGGC GCTGGAAATG
CCCTGGGAGG TGTTCACCCA GCGCGCCGAG ACCGCAGCGG CGATCAAGCT CGATCCGGTC
GTACCGCCGC AGCCCGACCC GGACCGCGTC GCCGCCGCCG CGAAGCTGAT CGCCGCGAGC
AAGACGCCGA TGATCTTCGT CGGCTCCGGT GCGCTCGACG CTGGCGACGA GATCCTCGAA
CTGGCCGAAG CGATCGACGC GCCGGTCGTC GCATTTCGCA GCGGCCGCGG CATTGTCAGT
AACCGGCACG ACCTCGGCCT GACCTTCGCC GCCGCCTATC GGCTGTGGCC GCAGACCGAT
CTGATCATCG GCATCGGCTC GCGGATGGAA CTGCCGACGA CGTTCCGCTG GCCGTTCCGG
CCGGACGGCC AGAAGTCGGT GCGGATCGAC ATCGATCCCG CCGAGATGCG CCGCTTTTCG
CCGGACGCTT CGATCGTCGC CGATGCCAAG GCCGGCACTC GTGCGCTGGT CGACGCGGTG
AGCAAGCGTG GCTACAACAA GACCCAAGGG CGGCGCGCGA CCATTCGCGA GGCGACCGCG
CTCACGCTGG AAGCGATCCA GTCGGTGCAG CCGCAGATGG CCTATTTGAA GATCCTGCGC
GAGGTGCTGC CGGACGACGC CATCGTCACC GACGAGCTGT CGCAGGTTGG ATTCGCCTCG
TGGTACGGCT TCCCGATCTA CCAGCCCCGC ACCTTTCTCA CATCGGGCTA TCAGGGCACG
CTCGGCTCCG GCTTCCCGAC CGCGCTCGGC GCCAAGGTCG CCTGCCCCGA CAAGCCGGTC
GTCGCCATCA CCGGCGACGG CGGTTTCATG TTCGCTGTGC AGGAGCTCGC CACCGCGGTG
CAGTTCAACA TCGGCGTGGT GACGCTGGTG TTCGACAATT CGGCCTATGG CAACGTCCGG
CGCGACCAGG TCACCCAGTT CGAAGGCCGC GTGGTGGCGT CCGATCTGGT CAATCCGGAT
TTCGTCAAGC TCGCGGAATC CTTCGGCGTC GCGGCGTCGC GGGTCGGCTC GCCCGATCAC
TTCCGCGCCG CGCTGGAGAA GGCGCTGGCG CATGGCGGGC CGTATCTGAT CGCGATCGAC
GTTCCGCGCG ACAGCGAAGC CAGCCCCTGG CCGTTCATCC ATCCGGCGAA GCCGTGA
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| Protein sequence | MASSTKPTSS NPTTRPKMSI MTGGEAIVQT LVAHGVDTVF GLPGAQIYGL FDGFAKAQLR
VVGARHEQAC GYMAFGYARA SGRPGVFSVV PGPGVLNAGA ALLTAFGCNE PVLCLTGQVP
SAYLGKGRGH LHEMPDQLAT LRSFIKWAER MEYPGNAPAL VARAFQEMMS GRRGPVALEM
PWEVFTQRAE TAAAIKLDPV VPPQPDPDRV AAAAKLIAAS KTPMIFVGSG ALDAGDEILE
LAEAIDAPVV AFRSGRGIVS NRHDLGLTFA AAYRLWPQTD LIIGIGSRME LPTTFRWPFR
PDGQKSVRID IDPAEMRRFS PDASIVADAK AGTRALVDAV SKRGYNKTQG RRATIREATA
LTLEAIQSVQ PQMAYLKILR EVLPDDAIVT DELSQVGFAS WYGFPIYQPR TFLTSGYQGT
LGSGFPTALG AKVACPDKPV VAITGDGGFM FAVQELATAV QFNIGVVTLV FDNSAYGNVR
RDQVTQFEGR VVASDLVNPD FVKLAESFGV AASRVGSPDH FRAALEKALA HGGPYLIAID
VPRDSEASPW PFIHPAKP
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