| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1701 |
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| Symbol | |
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| ID | 3908226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1935485 |
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| End bp | 1936156 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883595 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_485320 |
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| Protein GI | 86748824 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.535517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAAAG GGAGTGCGCC TTTGGCGGCC GATCTATTCG AGAATCTGTT CGATGGCCCG
AGGCGCGAGG ACATCGCTCC GGGCGCAGCG CTGCTGCACG GCTTCGCGCG GGCGCAGGAG
CTCGAATTGA TGGCGGTGAT CGAGGCCGTC GTCGCGCGCG CCCCGTTCCG CCACATGATG
ACGCCGGGTG GCCATACGAT GAGCGTGGCG ATGACCAGTT GCGGCCGTGC CGGCTGGGTC
ACCGATCGTC GCGGATATCG CTATGCCACC CACGATCCGG CGAGCGAGCT GCCATGGCCG
GAGATGCCGG ACGTGTTGCG CGAACTGGCG GTCAGCGCGG CGGCGGAAGC GGGGTTCGCG
GCCTTCACGC CCGATGCCTG CCTGATCAAT CGCTATGCGC CGGGTGCCAA GATGGCGCTG
CATCAGGACA AGGACGAGCA GGATTTCGCC GCCCCGATCG TCTCGGTGTC GCTCGGCCTG
CCGGCGGTCT TCCAATTCGG CGGGATGGCG CGCAGCGACA AGCCTCGCCG TTTCGAATTG
CGCCACGGCG ACGTGCTGGT GTGGGGCGGC GAGACCCGGC TGGTGTATCA CGGCGTGCTG
GCGCTGAAGG ACGGCGAGCA CCCGCTGCTC GGCCGACAGC GCATCAACCT GACGTTTCGC
AAGGCGCTGT AA
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| Protein sequence | MRKGSAPLAA DLFENLFDGP RREDIAPGAA LLHGFARAQE LELMAVIEAV VARAPFRHMM
TPGGHTMSVA MTSCGRAGWV TDRRGYRYAT HDPASELPWP EMPDVLRELA VSAAAEAGFA
AFTPDACLIN RYAPGAKMAL HQDKDEQDFA APIVSVSLGL PAVFQFGGMA RSDKPRRFEL
RHGDVLVWGG ETRLVYHGVL ALKDGEHPLL GRQRINLTFR KAL
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