Gene RPB_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1685 
Symbol 
ID3908672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1918473 
End bp1919279 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID637883579 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_485304 
Protein GI86748808 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAGG CGCTGCTGAT CGAGCACACG GACGGCGTTG ATTGGGTGAC GCTCAATCGC 
CCGGACAGCC TGAACGCGCT CAACCCCGAA CTGATCGACG CATTGAACGT CTATTTCGGC
CAGCTTCAGC GCAACCGCGA CACGCGCGTG GTGGTGTTGA AGGGCGCCGG CCGCGCGTTT
TGCGCCGGGC TCGATCTCAA AGACGCGATG GAGCGCCGGG GCACCCAACA GGAGCCGCCG
GGGGTAACCG AATCTCTCGA CTCGCAGCGC CGCATCGCCG ACATCGTCAT GCTGATGCGG
CGTTGTCCGC AGCCGATCAT CGCGCTGGTC CACGGCGCCG CTGCCGGTGG CGGCTTCGCG
CTGGCGCTGG CGAGCGATAT CCGCATCGCC GGCCGCAGCG CGCGGATGAA CTGCGCCTTC
ATCAAGCTCG GGCTCGGCGG CTGCGACATC GGCACCAGCT ACTTCTTGCC GCGCCTGGTC
GGCGTCTCGG TCGCATCCGA ACTGATTCTC ACCGGCCGCT TCATCGAATC CGAGCGCGCG
CTGATGACCG GACTGGTGTC CGAACTGGTC GAGGACGACC AGCTCGCAAC GGCGGCGCAG
CCTTATGTCG ACGCCATGCT GGCGGCGTCG CCGATCGGTC TGCGGCTGTC GAAGGAATGC
CTCAACATGG CGGTCGATGC CGGTTCGATC GAGCAGGTGA TCGCGATGGA AGATCGCAAT
CAGGTGCTGT GCTCGCGTTC GGAGGATTTC GGCGAAGGCA TCAGCGCCTT TCTGCAGAAG
CGCAAGCCGG TTTATCGTCG ACGCTAG
 
Protein sequence
MPQALLIEHT DGVDWVTLNR PDSLNALNPE LIDALNVYFG QLQRNRDTRV VVLKGAGRAF 
CAGLDLKDAM ERRGTQQEPP GVTESLDSQR RIADIVMLMR RCPQPIIALV HGAAAGGGFA
LALASDIRIA GRSARMNCAF IKLGLGGCDI GTSYFLPRLV GVSVASELIL TGRFIESERA
LMTGLVSELV EDDQLATAAQ PYVDAMLAAS PIGLRLSKEC LNMAVDAGSI EQVIAMEDRN
QVLCSRSEDF GEGISAFLQK RKPVYRRR