| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1684 |
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| Symbol | |
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| ID | 3908671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1917524 |
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| End bp | 1918282 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883578 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_485303 |
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| Protein GI | 86748807 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGA AAGACGTCTC CGTTCTCATC ACCGGCGGAG GGTCGGGGCT CGGCGCCGCG
ACGGCGCAAG CGATGGCCGC CAAGGGCGCC AAGGTCGCGG TGCTCGACAT GAACAAGGAC
AATGCCGAGA AGGTCGCGGC CGAGATCGGC GGCGTCGCCT GTGTCGGTGA CGTGTCGCAG
GAAGCGCCGG TCAAGGAAGC GATCGCCAAG GCCGAAGCCG CGCACGGCAT CGTCCGCGTG
CTGGTGAACT GCGCCGGCAT CGGCGGCGCA GTGAAGACCG TCGGCAAGAA CGGCGCCTAT
CCGCTCGATC ATTTCTCGCG CATCATCAAC GTCAATCTGA TCGGCAGCTT CAACTGCATC
CGGCTCGTCG CCGAGCGGAT GCAGAACGCG CCGACCATCG GCGAAGAGCG CGGCGTCTGC
ATCAACACCG CCTCTGTGGC GGCGTTCGAC GGCCAGATCG GCCAGGCGGC TTATTCGGCG
TCGAAGGGCG GCATCGTCGG CATGACCTTG CCGGTGGCGC GCGACCTCGC CTCGATGAAC
ATCCGCGTCA TGACGATCGC GCCCGGCCTG TTCCTGACGC CGCTGCTGAT GGGCCTGTCG
GAAGAAGCCC GCAAGAGCCT CGGCTCGCAG GTGCCGCATC CGGCCCGCCT CGGCGATCCG
TCGGAGTACG CGTCGCTCGC GGTGCAGATC GTCGAGAACC CGATGCTGAA CGGCGAGACC
ATCCGTCTCG ACGGCGCGAT CCGCATGGCG CCGCGGTAG
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| Protein sequence | MQLKDVSVLI TGGGSGLGAA TAQAMAAKGA KVAVLDMNKD NAEKVAAEIG GVACVGDVSQ
EAPVKEAIAK AEAAHGIVRV LVNCAGIGGA VKTVGKNGAY PLDHFSRIIN VNLIGSFNCI
RLVAERMQNA PTIGEERGVC INTASVAAFD GQIGQAAYSA SKGGIVGMTL PVARDLASMN
IRVMTIAPGL FLTPLLMGLS EEARKSLGSQ VPHPARLGDP SEYASLAVQI VENPMLNGET
IRLDGAIRMA PR
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