| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1681 |
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| Symbol | |
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| ID | 3908668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1913283 |
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| End bp | 1914827 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883575 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_485300 |
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| Protein GI | 86748804 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC CGTCGATTCA CGCCCGCACC CAGCCCGACA AGATCGCCTA TCAGATGGCC
TCGACCGGCA AGGCGATTAC GTATCGCGAG CTCGACGAGC TCTCGAACCA GGGCGCGCAA
CTGTTCCGCA CGCTCGGCCT GAAGGCCGGC GATCACGTCG CGCTGCTGAT GGAGAATCGC
CTCGCCTTCA TGGAGATCTG CTGGGCGGCG CAGCGCGCGG GCCTCTACTA CACGGCGATC
AGCCGCTACC TGAAGCAGGA CGAGATCGCC TATATCGTGC AGGATTGCGG CGCCCGTGTC
GTGATTACCT CGCCGCAGGG CGCGGACGCG ATCGCGCCGC TGGTGAGCAC CCTGCCCGGC
GTCGCCTTCT TCATGGTCGA TGAACCCGCT CCGGGTTTCC GCTCCTGGGA CAAGGAGGCC
GGCGCGCAGC CGACGACGCC GATCGCCGAC GAAGTCGCCG GCTACGACAT GCTGTATTCG
TCCGGCACCA CCGGCCGCCC CAAGGGCATC AAGCGCGAAT TCGAAGGCAA CGCCATCGAC
GTGCCGAGCC CGTTTCTGCG TCTGCTGTGC GAGCGGATGT GCGGCATGAA CCAGGACAGC
ATCTATCTGT CGCCGGCGCC GCTGTATCAC GCCGCTCCGC TGCGCTTCAA CATGATGGCG
ACCACGCTCG GCGGCACCTC GGTGATCATG GAGCATTTCG ACGCCGAGCA GTTCCTGGCG
CTGGTCGAGA AGTACAAGGT GACCCAGTCG CAACTCGTTC CGACGATGTT CGTGCGGATG
CTGAAGCTGC CGGACGAGGT CCGCACCCGC TACGACGTCT CGTCGTTGAA GGGCGCGATC
CATGCGGCCG CTCCCTGCCC GGTCGACGTC AAGGCGAAGA TGATCGAGTG GTGGGGACCG
ATCCTGATCG AGTACTACGC CGGCTCCGAG GGCAACGGCG TCACGGTGTC GACCTCGCAG
CAATGGCTCA GCCATCGCGG CACGGTCGGC AAGGCCGTGG TCGGAGTGAT CAAGATCCTC
GACGAGGCCG GCGAGGAGCT GCCGACCGGC GAGATCGGCA CCGTGTATTT CGCCGACGCG
CCGGCGTTCA GCTATCACAA CGATCCCGAC AAGACAAAGA ACGCTTACAA CGACAAGGGC
TGGTCCACGC TCGGCGACGT CGGCTATCTC GACGCCGAGG GCTTCCTCTA TCTCACCGAC
CGCAAGAGCT ACATGATCAT CTCCGGCGGC GTGAACATCT ATCCGCAGGA GACCGAGGAC
GTGCTGTTGA CGCATCCCGA CGTCGCCGAC GTCGCGGTGT TCGGCGTGCC GAACGAGGAG
ATGGGCGAGG AGGTCAAGGC CGTAGTGCAG ACCCGCGACG GCGTCACGCC GAGCAAGGAG
CTCGAGGCCA AACTGATCGG CTTCTGCCGC GACCGGCTCT CCGCGATCAA ATGTCCGCGC
TCCATCGACT TCGAAGCAGA GCTGCCGCGC ACGCCGACCG GCAAGCTGGT CAAGCGCCAT
CTGAAGGATC GCTACTGGCC GAAGAAGCAG GCCGCGATGG CCTAA
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| Protein sequence | MTHPSIHART QPDKIAYQMA STGKAITYRE LDELSNQGAQ LFRTLGLKAG DHVALLMENR
LAFMEICWAA QRAGLYYTAI SRYLKQDEIA YIVQDCGARV VITSPQGADA IAPLVSTLPG
VAFFMVDEPA PGFRSWDKEA GAQPTTPIAD EVAGYDMLYS SGTTGRPKGI KREFEGNAID
VPSPFLRLLC ERMCGMNQDS IYLSPAPLYH AAPLRFNMMA TTLGGTSVIM EHFDAEQFLA
LVEKYKVTQS QLVPTMFVRM LKLPDEVRTR YDVSSLKGAI HAAAPCPVDV KAKMIEWWGP
ILIEYYAGSE GNGVTVSTSQ QWLSHRGTVG KAVVGVIKIL DEAGEELPTG EIGTVYFADA
PAFSYHNDPD KTKNAYNDKG WSTLGDVGYL DAEGFLYLTD RKSYMIISGG VNIYPQETED
VLLTHPDVAD VAVFGVPNEE MGEEVKAVVQ TRDGVTPSKE LEAKLIGFCR DRLSAIKCPR
SIDFEAELPR TPTGKLVKRH LKDRYWPKKQ AAMA
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