| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1675 |
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| Symbol | |
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| ID | 3908662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1906086 |
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| End bp | 1907459 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883569 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_485294 |
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| Protein GI | 86748798 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG ACGCGCCGGC GGACCGGCCG CTCCCCGCCG CTTCCGCCGA GCGACTGCTC
GCCGCGCCGA TCCTGCCGAC TCTGATCCGG CTGGCGATTC CGAACGTGAT CGCGATGGTC
GGCACCGCGG TGGTGGCGAT CGCCGAAACC TCCTATATCG GCCGTCTCGG CACCGAGCCG
CTGGCGGCGA TCGCGCTGGT GTTCCCGTTC GCGATGCTGA CGCAGATGAT GTCGGCGGGC
GCGATGGGCG GCGGGGTGTC CTCCGCCGTC AGCCGCGCAC TCGGCGCCGG AGACCGCACA
CGCGCCGAAG TGCTGGCGCT GCACGCGATC ATCATCGGCA TCGCCGCCGG GCTGGTCTTC
ACGCTGCTGA TGCTGCTGTT CGGGCGGTCG CTCTACGCGC TGCTCGGCGG GCGCGGCGAA
GTCCTCGAAC AGGCCTGCAG CTATTCGGTG GTGCTGTTCT CGGGCGCGGT GTCGATCTGG
CTGGTCAACA CGCTGGCGTC GGTGCTGCGC GGCACCGGCG ACATGGTGCT GCCGTCGGCG
ACGCTGCTCG GCGTCGCGGC GCTGCAGATC GTGATCGGCG GCGGACTCGG GCTCGGCCTG
TTCGGCCTGC CGCGGCTCGG CATGGCGGGC GTCGCGTCGG GCCAGTTGAT CGCGTTTTCG
CTCGGCGCGC TGTTCCTGCT GGTCTACATG GCGAGCGGCC ACGGACGGTT GACGCTGCGG
GTCAAGTCGT TCGTGTTTCA GCGGCCGATG TTCGTCGACA TTCTCAAGTT CGGCGCGATG
GCCTGCCTCT CGCCGCTGCA ATCGGTGCTG ACGATCCTGA TCTTCACCAA AATCATCGCG
AGCTACGGGG TCGCGACGCT CGCCGGCTAC GGCATCGGCT CGCGTCTGGA ATTCCTGCTG
ATCCCGATCG CCTTCGCCTT CGGCGTCGCC TCGATCCCGA TGGTCGGCAT GGCGATCGGC
GCCGGTCAGG TGGCGCGGGC GCGACGCGTG GCCTGGATCG CCGGGGCGGT CTCGGCGCTG
ATCCTCGGGC TGGTCGGGCT CGTGCTGGCG ATCTGGCCGT CGCTGTGGGT CGCGCTGTTC
ACCAGCGATC CCGCGGTGGC CGCGGCGGCG AGTTCCTATT TCAACTGGGC CGGTCCCGGC
TTCGCTTTCT TCGGCCTCGG CGTGACGCTG TATTTCGCCT CGCAGGGCGC GGCGAAGGTC
GGCGGCCCGG TGCTCGCGGC GACGGCGCGA CTGCTGCTGG TCGCGATCGG CGGCACCGCG
CTGATCACGT CCGGCGCCCC GGCCTCGGCG CTGTTCGCAC TGGTGCTGGT GGCGATGGTG
GTCTACGGAC TCGGAACCGC CGCCGCGATC CACCTGACAC GCTGGGTCAA GTGA
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| Protein sequence | MTIDAPADRP LPAASAERLL AAPILPTLIR LAIPNVIAMV GTAVVAIAET SYIGRLGTEP
LAAIALVFPF AMLTQMMSAG AMGGGVSSAV SRALGAGDRT RAEVLALHAI IIGIAAGLVF
TLLMLLFGRS LYALLGGRGE VLEQACSYSV VLFSGAVSIW LVNTLASVLR GTGDMVLPSA
TLLGVAALQI VIGGGLGLGL FGLPRLGMAG VASGQLIAFS LGALFLLVYM ASGHGRLTLR
VKSFVFQRPM FVDILKFGAM ACLSPLQSVL TILIFTKIIA SYGVATLAGY GIGSRLEFLL
IPIAFAFGVA SIPMVGMAIG AGQVARARRV AWIAGAVSAL ILGLVGLVLA IWPSLWVALF
TSDPAVAAAA SSYFNWAGPG FAFFGLGVTL YFASQGAAKV GGPVLAATAR LLLVAIGGTA
LITSGAPASA LFALVLVAMV VYGLGTAAAI HLTRWVK
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