| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1673 |
|---|
| Symbol | |
|---|
| ID | 3908660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1904353 |
|---|
| End bp | 1905504 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637883567 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485292 |
|---|
| Protein GI | 86748796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.50002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAA GCGACAGCGG CGCGTTCTAT GACGGCGTGA CGGTTTTCCG CGGTTTTCGC
AGCGTGATGG ACCCGGCGCT GTATTCGGCG CTGCCCGACG ACTGGTTCAT CGGCACCGCC
GACATCGTCG AGTCGACCAA GGCGATCGCG GCGCAGCGCT ACAAGGCCGT CAACATGGCC
GGCGCGTCGG TGATCGCCGC GGTCACCAAC GCGCTCGGGG GCCGCGACTT TCCGTTCGTG
TTCGGCGGCG ACGGCGCGAG CTTCGCGGTC GCGCCCGGCG ATCTTGCCGG TGTGCGCGAA
GCGATGGCGG CCTCCGCTGC CTGGGTCAGG GACGAACTCG AATTGACGAT GCGCATCGCG
CTGGTGCCGG TCGCCGCTGT CCGGGAGAAG GGGCTCGATG TCCGCGTCGC CCGGTTCGCG
CCGTCGGCGA ACGTGTCCTA CGCGATGTTC TCGGGCGGCG GGCTCGCCTG GGCGGAGGCG
GCGATGAAGC GCGGCGAATT CGCCGTCCCC CCGGCGCCGC CCGGAACGAC GCCGGACCTC
ACCGGCCTGT CCTGCCGGTT CGAGGAGATT CCCTCGGTGC AGGGCGTGAT CCTGTCGGTG
CTGATCGTGC CCGCCGCCGG TGCCGATCCG GCCGCGTTTC GCCGCCTGAT CGAGGAAGCG
GTCGCGCGCA CCGAGCGTAG CCCCGATGCG GGCCGGCCGG TGCCATCGCA CGGCCCCGCC
TTGCGATGGC CGCCCGCGGG GTTCGACCTC GAGGCGCGCG CGGCGCGCGG CGGTCCGCTG
ATCAAGCGCC GCATCGTCGT GTTGCTGTAC ACGCTGTTCG TGTATGTGGT CATGCGCTTG
CGCATCAGCG TCGGCGGCTT CGTGCCGCGA ACCTATATCG CGGAGGTCGT GGAGAATTCC
GATTTCCGCA AATACGATGA CGGCCTGCGC ATGATCCTGG ATTGCACGCC CGAACTCGCC
GATGCGTTGG AGCAGCTCCT CGCCGCCGCA GCGTCCGCCG GCGTGGCGCG CTACGGCTTG
TTCCGGCAGG AGGCCGCGAT GATGACCTGC TTCACGCCGT CGCTGACGCG CAGCGATCAT
GTGCATTTCA TCGACGGCGC CGGCGGCGGC TATGCCTCCG CGGCGATCAC GCTGAAAGCC
ATGCAGGCCT GA
|
|---|
| Protein sequence | MDGSDSGAFY DGVTVFRGFR SVMDPALYSA LPDDWFIGTA DIVESTKAIA AQRYKAVNMA
GASVIAAVTN ALGGRDFPFV FGGDGASFAV APGDLAGVRE AMAASAAWVR DELELTMRIA
LVPVAAVREK GLDVRVARFA PSANVSYAMF SGGGLAWAEA AMKRGEFAVP PAPPGTTPDL
TGLSCRFEEI PSVQGVILSV LIVPAAGADP AAFRRLIEEA VARTERSPDA GRPVPSHGPA
LRWPPAGFDL EARAARGGPL IKRRIVVLLY TLFVYVVMRL RISVGGFVPR TYIAEVVENS
DFRKYDDGLR MILDCTPELA DALEQLLAAA ASAGVARYGL FRQEAAMMTC FTPSLTRSDH
VHFIDGAGGG YASAAITLKA MQA
|
|---|
| |