| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1669 |
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| Symbol | |
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| ID | 3908656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1898155 |
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| End bp | 1901706 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883563 |
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| Product | pyrroloquinoline-quinone aldehyde dehydrogenase |
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| Protein accession | YP_485288 |
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| Protein GI | 86748792 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.224955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC CGACGCCGGC GCCGAAGGAC CTGCTTGCTC GCACGGGCAC GCTTGCCGTG
TTGCGGCCGT CGCAGCACGT CAAGGGCCTG GTGCCGACGG CGCCGCCGCC GGAAGGCGCG
CTCGACCTGT TCCTGTTTCT CGACGATTCG GGTCGGGTGC TCGCCTTCAA CGGCCATGTC
GATCTCGGCA CCGGCATCCG CACCGCGCTG GCGCAGATCG TGGCGGAAGA ACTCGACGTG
TCGTTCGCCG CCGTCACCAT GGTGCTCGGC CACACCTCCG GCACGCCGAA CCAGGGCGCA
ACCATCGCCA GCGACAGCAT CCAGGTCTCG GCGCTGCCGC TGCGCAACGC TGCGGCGCAG
GCGCGGCATC ATCTGATCGC CCTGGCCGCG GCAGAACTCG AACTGCCGCC GAACGATCTG
GCCGTCACCG ACGGCGTCGT GCATCCGCGC GGCGGCGCCA ATATCGGCGT GTCCTATGCG
TCGTTGCTGC AGGGCCGCAC CGACCGGCTG TTGCTCGCCG AGGGTGTGGC GGTGAAGCCG
GTGGCCGAGC ATCGCATCGT CGGTCAGCGC ATCGCGCGCT CGGATATTCC GGCCAAGGCG
ACCGGCGACT TCGTCTATGT GCACGACGTG CGCGTCCCCG GCATGTTGCA CGGCCGCGTG
GTGCGGCCGC CTTATGCCGG AATCGATGCC GGCGACTTCA TCGGCGCCAG CCTGATCGGC
GTCGACGAAA CCTCCGTCGC GCATATTCCG GGTGTGGTCG CGGTCATCAG CATGGGCGAC
TTCGTCGGCG TCGTCGCCGA GCGCGAGGAG CAGGCGGCCG AAGCCGCGCG CGTGTTGAAG
GTGGAATGGA AGCCGCCGCC GCCGCTGCCG GATCTCGATG ATCTTGCCAC GGCGCTGCGC
GCCAACCCGG CGACCACGCG GACGCTGCAC GACAAAGGCG ACGTCGATCG CGCCCGCGCC
GACGCCGCGG TGCCGATGGA CCGCAGCTAT GTCTGGCCGT ATCAGATGCA CGGCTCGATC
GGCCCGTCCT GCGCGGTGGC GGACGTCCGC GACGGCGCCG CCACGATCTG GTCCGGCACG
CAGAATCCCT ATCCGCTGCG GCTCGATCTC TCGGTGCTGC TCGGCATCCC CGAGTCCGAT
ATCGAGGTGC TGCGGTTTGA AGCTGCCGGC TGCTACGGCC GCAACTGCGC CGACGACGTT
TCTGCGGATG CGGCGCTGCT GTCGCGCGCG GTGGGGCGGC CTGTCCGCGT CCAACTGACC
CGCGAGCAGG AGCACGCCTG GGAGCCGAAG GGCGCGGCGC AACTGATGGA GATTTCCGGC
GGGCTGAACG CCGACGGCAG CCCGGCCGCG TATGATTTCG CCACGCGCTA TCCGTCGAAT
GCGGCGACGA CGCTGGCGCT GCTGCTGACC GGGCGCGTGC CGGCGAACAA TCCGGTGTTC
GAGATGGGCG ATCGCACCGC GATCCCGCCT TACGCCTACG ACAACATCCG CGTTAAGGTG
CACGACATGG CGCCGATCGT GCGCGCGGCG TGGCTGCGTG GCGTCTCGGC GCTGCCGAAT
TCGTTCGCGC ATGAGAGCTA TATCGACGAA CTCGCCGCCG CGGCCGGGGT CGATCCGGTT
GAGTATCGGC TGCGCTATCT GCACGACCCG CGCGCGGTCG ATCTGGTCAA GGAAGTCGCC
GCGCGCGCCG GCTGGGCGCA TCGCACCGGC CCGCGCCAGG AAGTCGTCGA TGGCGACGTC
GTGCGCGGGC AGGGCATCGC CTATGCGCTG TACGTCCACT CCAAATTCCC CGGCTACGGC
GCGGCGTGGT CGGCGTGGGT CGCCGATGTC GAGGTCAACA AGGCGACCGG CGACGTCGCG
GTGAAGCGCG TCGTGGTCGG TCAGGATTCC GGGCTGATGA TCAATCCCGC CGGGATCGAG
CATCAGATCC ACGGCAACGT CATTCAATCG ACCAGCCGCG TGCTGAAGGA ACAGGTGAGC
TTCACCGGCA CCGCGGTGGC CGACAAGGAA TGGGGCGCGT ACCCGATCCT CACCTTCCCG
GACGTGCCGG TCATCAACGT CGTGCTGATG CCGCGCCCGA ACGATCCGCC GCTCGGCAGC
GGCGAATCCG CCTCGGTACC GTCGGCGGCG GCGATCGCCA ATGCGATCTT CGATGCCACC
GGGGTGCGGC TGCGCGAGCC GCCATTCACG CCGGAGCGGG TGCGGGCCGC GCTGGGCCAT
CCGATGCTGC CGCCGCCGCC CGCGCCTGCG CCGAAGAAGC GGTCGTGGTT GGCGCTGGCC
GGCGCGGCGC TGGTCGGCGC GCTCGGCATG GCGACGGTGG CGCTGCCGAT CCGCGGTGCC
ATTGCGCCGA TCGCGCCGCC CGATCCGGCG AGCTTCTCCG CCGAGATGAT CTCGCGCGGA
CGGCAGCTCG CCGCGCTCGG CGGCTGCGCG GTGTGCCACA CCGAGATCGG CGGCGCGACC
AATGCGGGCG GCCGCCCGGT CGAGACTCCG TTCGGCACGG TGTACTCCAC CAACCTCACG
CCAGATCCGG AAACCGGCAT CGGCCGCTGG TCCTACGCGG CGTTCGAGCG CGCGATGCGC
GAGGGCATCG CCCGCGACGG GCGCCATCTC TATCCGGCGT TTCCCTACGC CTCGTTCACA
CGCACGAGCG ATATCGATCT GCAGGCGCTG TACGCCTATC TGATGACGCA GACGCCGGTG
AAGGCGCCGA CGCCCGAGGC GCGGATGGCG TTTCCGTTCA ATCTCCGGCC GCTGATGGCC
GGCTGGAATG CGCTGTTTCT GCGCACCGGC CAGATGCAGG CCGACCCCGT CAAAGCGCCG
CAATGGAATC GCGGCGCGTA TCTGGTCGAG AGCCTCGGCC ATTGCGGCGC CTGCCACACG
CCGCGCAATG CACTCGGTGC CGAACAGGCG CGGACCGCGT ATCTCAGTGG CGGCGTCGTC
GACGGCTGGC ACGCCCCGGC GCTGAACGCG CTCTCCAGTG CGCCGATTCC GTGGACGGAG
GCCGAGCTGT TCTCTTATCT GCGCACCGGG TTCTCGCAGT TCCACGGCAC GGCGGCCGGG
CCGATGGCGC CGGTGGTGGA GCAACTCGCC GCGCTGCCGG ATGCCGACAT CCGCGCCATG
GCGACCTATC TGGCGTCGTT CGCGCCGCCG GCCGACGAGG CGCCCGCCGC CCGCGCCGCC
GCGCTGCAGG CCGCGGCGAC GGCGACGCTG CGGCCGCTGG ATTCGCTCGG CGGCAGGCTC
TACGAGGGCG CCTGCGCCTC CTGCCACAGC GACGACGGGC CGACCCTGTT CGGCGTGCGC
CCGGCGCTGG CGCTCAACAC CAACGTTCAC GCCGCGGACC CCGACAATCT GATTAGGGTC
ATTCTAGACG GAATACCTAG TCCGGCGGCG GCCGAACTGG GGGATATGCC CGGGTTCCGC
CACAGTTTCG ACGATAACCA GATCGCGGCG CTGGTGACTT ATCTCCGCGC CTCCTTCGCC
CCCCAGGCGC CCGCCTGGGG CGGCGTGGAA CAAACGGTGG CGCGCCTGCG CGCCCACCGA
GGCTCCCACT GA
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| Protein sequence | MSEPTPAPKD LLARTGTLAV LRPSQHVKGL VPTAPPPEGA LDLFLFLDDS GRVLAFNGHV
DLGTGIRTAL AQIVAEELDV SFAAVTMVLG HTSGTPNQGA TIASDSIQVS ALPLRNAAAQ
ARHHLIALAA AELELPPNDL AVTDGVVHPR GGANIGVSYA SLLQGRTDRL LLAEGVAVKP
VAEHRIVGQR IARSDIPAKA TGDFVYVHDV RVPGMLHGRV VRPPYAGIDA GDFIGASLIG
VDETSVAHIP GVVAVISMGD FVGVVAEREE QAAEAARVLK VEWKPPPPLP DLDDLATALR
ANPATTRTLH DKGDVDRARA DAAVPMDRSY VWPYQMHGSI GPSCAVADVR DGAATIWSGT
QNPYPLRLDL SVLLGIPESD IEVLRFEAAG CYGRNCADDV SADAALLSRA VGRPVRVQLT
REQEHAWEPK GAAQLMEISG GLNADGSPAA YDFATRYPSN AATTLALLLT GRVPANNPVF
EMGDRTAIPP YAYDNIRVKV HDMAPIVRAA WLRGVSALPN SFAHESYIDE LAAAAGVDPV
EYRLRYLHDP RAVDLVKEVA ARAGWAHRTG PRQEVVDGDV VRGQGIAYAL YVHSKFPGYG
AAWSAWVADV EVNKATGDVA VKRVVVGQDS GLMINPAGIE HQIHGNVIQS TSRVLKEQVS
FTGTAVADKE WGAYPILTFP DVPVINVVLM PRPNDPPLGS GESASVPSAA AIANAIFDAT
GVRLREPPFT PERVRAALGH PMLPPPPAPA PKKRSWLALA GAALVGALGM ATVALPIRGA
IAPIAPPDPA SFSAEMISRG RQLAALGGCA VCHTEIGGAT NAGGRPVETP FGTVYSTNLT
PDPETGIGRW SYAAFERAMR EGIARDGRHL YPAFPYASFT RTSDIDLQAL YAYLMTQTPV
KAPTPEARMA FPFNLRPLMA GWNALFLRTG QMQADPVKAP QWNRGAYLVE SLGHCGACHT
PRNALGAEQA RTAYLSGGVV DGWHAPALNA LSSAPIPWTE AELFSYLRTG FSQFHGTAAG
PMAPVVEQLA ALPDADIRAM ATYLASFAPP ADEAPAARAA ALQAAATATL RPLDSLGGRL
YEGACASCHS DDGPTLFGVR PALALNTNVH AADPDNLIRV ILDGIPSPAA AELGDMPGFR
HSFDDNQIAA LVTYLRASFA PQAPAWGGVE QTVARLRAHR GSH
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