| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1664 |
|---|
| Symbol | |
|---|
| ID | 3908651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1893756 |
|---|
| End bp | 1894340 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637883558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485283 |
|---|
| Protein GI | 86748787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.346529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA AAATCCGCAA GATCGTCGTC GTCGTGGAAG AGACGCTGAC GGAGATGGGA
CGTTCCGTGA CGCCGCCGAC GCGGCGCGCG GCGGCGGTCG CGGTGATCGA AAATCCGTTC
GCCGGCCGTT ATGTCGAGGA CCTCTCGGAG CTGATCGCGA TCGGGGAAGA ACTCGGCGAG
TTGCTCGCGC AGAAGGCGGT GGACGCGCTC GGCATCGACG GCGGCAAGGC CGAAAGCTAC
GGCAAGGCCG CGCTGGTCGG CGAGAACGGC GAGCTCGAAC ACGCCGCAGC CTTGCTGCAC
CCGAAAATGG GCGCGCCGGT CCGCAAGGTG CTGGGCAAGG GCGCGGCGCT GATCCCCTCG
TCGAAGCGAC GCGGCGGCCT CGGCGCCGAG CTGGACATTC CGCTCGGGCA CAAGGACGCG
GCCTTCGTCC GCAGCCATTT CGACGGCATG CAGGTGAGCG TGGCGGATGC GCCGCGCGCC
AACGAGATCG TGGTGGCGGT GGCCATCACG GATTCCGGCC GACCGCTGCC GCGCGTCGGC
GGACTGACGA CCGCCGAGAT CAAGGGCGAA GACGGATTGC GCTGA
|
|---|
| Protein sequence | MSAKIRKIVV VVEETLTEMG RSVTPPTRRA AAVAVIENPF AGRYVEDLSE LIAIGEELGE
LLAQKAVDAL GIDGGKAESY GKAALVGENG ELEHAAALLH PKMGAPVRKV LGKGAALIPS
SKRRGGLGAE LDIPLGHKDA AFVRSHFDGM QVSVADAPRA NEIVVAVAIT DSGRPLPRVG
GLTTAEIKGE DGLR
|
|---|
| |