Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1661 |
Symbol | |
ID | 3908648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1889645 |
End bp | 1890427 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883555 |
Product | ABC transporter related |
Protein accession | YP_485280 |
Protein GI | 86748784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGT TGCTCGAAGT CAAAGGACTG GTGAAGTCCT ACGCCGGAGT TCATGCCGTG CGCGACGTCA GCTTCGCCGT GCGCCCCGGC GAAATCCTGG CGCTGATCGG CCCCAACGGC GCCGGCAAGA GCACCTGCTT CAACATGCTC AACGGCCAGA TCCGGCCCGA TGTGGGCTCG ATCAAGCTCG CCGGCGAGGA GATCGTCGGC CTGCCGCCCC GCACGGTGTG GCGGCGCGGC GTCGGCCGCA CCTTCCAGAT CACTGCGACC TTCTCGTCGA TGACGGTGCG CGAGAATATT CAGGTCGCGC TGCTGTCGTT TCACCGCCGG CTGTGGTCGA TGGTCGGCTA TGCGGGTGCG AGCCATCGCG ACGAAGCGAA CGAACTCCTC GCCCTCGTCG GAATGCAGGA GCAGGCCGAG CGGCCGTGCG GCGAACTCGC ATACGGCGAT CTGAAGCGGC TCGAGCTGGC CGTGGCGCTC GCCAACCAGC CGCGGCTGCT GCTGATGGAC GAACCGACCG CCGGCATGGC GCCGAAAGAG CGCGTCGAGC TGATGCGCCT CACCGCCGGC ATCGCCCGCG ACAAGGACAT CGGCGTGTTG TTCACCGAGC ACGACATGGA TGTGGTGTTC GAGCACGCCG ACGAGGTGAT GGTGCTGAAC CGTGGGCAAT TGGTCGCGCG CGGCACGCCG CAGCAGGTCC GCAACGATCC GCACGTGCAG GCGATCTATC TCGGCGACGG CCTGCTCTAC GATCCCAAGC ATCGCAAGGA GGCCGTGCAA TGA
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Protein sequence | MTALLEVKGL VKSYAGVHAV RDVSFAVRPG EILALIGPNG AGKSTCFNML NGQIRPDVGS IKLAGEEIVG LPPRTVWRRG VGRTFQITAT FSSMTVRENI QVALLSFHRR LWSMVGYAGA SHRDEANELL ALVGMQEQAE RPCGELAYGD LKRLELAVAL ANQPRLLLMD EPTAGMAPKE RVELMRLTAG IARDKDIGVL FTEHDMDVVF EHADEVMVLN RGQLVARGTP QQVRNDPHVQ AIYLGDGLLY DPKHRKEAVQ
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