| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1642 |
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| Symbol | |
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| ID | 3909919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1871951 |
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| End bp | 1872994 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883536 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
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| Protein accession | YP_485261 |
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| Protein GI | 86748765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.890674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCG GCATCAACGG CATGGGCCGG ATCGGACGAT TGGCGCTGCG CGCGGCACTC
GGCGGAATTC GGCGACCTGA CAACGATCCG CGCGGGGACA ACCGCCTGGA CGTCGTCCAT
GTCAACGAAC TCAAGGGTGG CATCGCCGCC ACCGCTCATC TGCTCGAATT CGATAGCGTG
CACGGGCGCT GGCACCAGCC GATCGCGGTG GAATCCGACC GCGTGATAGC GCTCGGCACC
CAGCGGATCG GTTTCAGCGA GCACGCTGCG CCCGCTGACG TCGCATGGGG CGATCTCGGA
TGCGATGTGG TGTTGGAATG CACCGGGAAG TTCCTCACGC CCGCTCAGTT GCAAGGCTAT
TTCGACCGCG GTGTGAAACG GGTGATCGTC GCCGCACCGG TCAAGGACGA GGCCGCCCTC
AACATCGTGG TCGGCGTCAA CGACAAGCTC TACGAGCCGC AGCGGCACCG GCTGCTGACA
GCGGCCTCCT GCACCACCAA TTGCCTCGCG CCGGTGGTGA AGGTGATCCA CGAATCGATC
GGAATCCGGC ACGGCCAGAT CACGACCATT CATGACCCGA CCAACACCAA CGTGGTGGTC
GATGCGCCGC ACAAGGATCT GCGTCGCGCA CGCTCTGCGA TGCTGTCGCT GCAGCCGACC
ACGACGGGCA GTGCCACCGC GATCGCATTG ATCTATCCCG AGTTGAAAGG GAAGCTGAAC
GGCCACGCGG TCCGCGCGCC CGTTCTGAAT GCCAGCCTGA CCGATTGTGT GTTCGAACTG
AACCGGCCGA CCTCGGTCGA GGAGGTCAAC GCCCTGTTCA AATCGGCGTC GGAGGGCGTG
CTGGCGGGCA TTCTCGGCTA TGAGACACGA CCGCTGGTGT CGGCCGACTA CACCAATGAT
TCCCGCAGTT CGATCGTCGA TGCGCTGAGC ACCATGGTGA CCGACGAGAC GTTGCTGAAG
GTCTATGCCT GGTACGACAA CGAGGTCGGC TATGCCTGCC GGATGGTCGA CCTCGCCGCC
ATCGTGCAAC GCGCGGGCGT CTGA
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| Protein sequence | MKVGINGMGR IGRLALRAAL GGIRRPDNDP RGDNRLDVVH VNELKGGIAA TAHLLEFDSV
HGRWHQPIAV ESDRVIALGT QRIGFSEHAA PADVAWGDLG CDVVLECTGK FLTPAQLQGY
FDRGVKRVIV AAPVKDEAAL NIVVGVNDKL YEPQRHRLLT AASCTTNCLA PVVKVIHESI
GIRHGQITTI HDPTNTNVVV DAPHKDLRRA RSAMLSLQPT TTGSATAIAL IYPELKGKLN
GHAVRAPVLN ASLTDCVFEL NRPTSVEEVN ALFKSASEGV LAGILGYETR PLVSADYTND
SRSSIVDALS TMVTDETLLK VYAWYDNEVG YACRMVDLAA IVQRAGV
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