| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1634 |
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| Symbol | |
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| ID | 3909911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1841162 |
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| End bp | 1843354 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883528 |
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| Product | ABC transporter related |
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| Protein accession | YP_485253 |
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| Protein GI | 86748757 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.46582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGTTC GTTCCGTCAA GGTTGGCCCG GAAGAGGCGT TGCCCGTCGA GCAAGTCAGC
GCCGATGTGC CGCCGGCCGA TTCGCTCAGC GACAGTCTGC TGTACCTCGC AGCACATCAT
GGTCGCGCAT TGAGCCGCAG CGCCCTGCTG TCGGGACTGC CGCTCGAGCG CTACGGCCTC
GGCCTCAGCC TGTACGAGCG GGCGGCGCAG CGGGCAGGGC TCGAAGCGCA ATTGGTCGAG
CGGCCGTTGC ACGAAATCCC ATCGCTGGTG CTGCCCTGCG TGTTGCTGTT CCACGACGGC
TCCACGCGCG TCATGCTCGC CATGGATGAG GCGGCCGGTC GCGTCAGCAT CGTCGACCCC
TCCCGCGGCA ACGGACCCGC GACTGCGCCG ATCGAAGCCG TTGCCGCGCG GTATGTCGGC
TTCGCCTATC TCATTCGACC GGCCGGGATG GCGGATGCCC GGACGGGGGC CGCTGGCGAT
CTTCCGAAGA CGCACTGGTT CTGGTCGGTG GTGAGCCGGT TCGGCGCCAA TTACGGCCTC
GTTGCGATTG CGGCCTTCAT CGTCAATATC CTCGCCCTTG CGGCGCCGCT GTTCATTATG
AGCGTGTACG ATCGCGTCAT TCCGAACGGT GCGATCCCGT CCCTGGTCGC GCTGGGGGGC
GGGCTTGCGC TCGCGATCGG CTTCGATTTC TTGCTCAAGG TGGTGCGCAG TCGCATCATC
GATATGACCG GCAAGCAGAT CGACGTGGTG CTGGCCGCCG ACATCTTCGA GCACATTATG
GCGCTGAAGA TGGACAAGCG TCCGCCTTCG GTCGGCATCC TGGCCAACCA GATGCGCGAC
TTCGACTCCG TCCGGGAGTT TTTCACCTCG GGCACCGTGG TCTCGGCCAC CGACATGCTG
TTCGCGATCC TGTTCATCGC GGTGCTGTTC ATCATCGCGG GACCGATAGC CTGGATTCCG
CTTCTGATGC TGCCGATCAT GATCGGTGTC GGGCTTCTCA TTCAGCGGCC GCTCGACCGC
GCGATGCGGC GCATGCAGGC GGAATCCGCG GCCCGGCACG GCATTCTGGT GGAGGCGTTG
AACGGCATCG AAACCGTGCG TGCCGTGGGA GGTGAGGGGC GCGTGCAGAC GGTGTGGGAG
CGCTCTGTTG CGGCGACGGC GCGCTCGAGC GAGGAGGTGC AGTTCTGGGC CTCGCTGGCG
CTCACGACCG CAAGCGCGGC CAGCCAGCTG TGTAGCTTGC TGTTGGTGGT CGCGGGCGTG
TTCTTGATCC TCGACGGCAA GCTGTCGGTC GGCGCTCTCA TCGCCGCCAA CATGCTGTCG
GCGCGGATCC TCGGACCGAT CGCAGGAATC GCTGCGGTGA TGACCCGGGC GACCCAGACC
ACCTCGGCTT TGCGGTCGAT CGATCGCCTG ATGGGATTGG AGCGCGAGCG ACCGCCGGAA
AAGATCTATG TGGCGCGCGA AATCAAGGAC GGCCGCATCC AGTTCAAGGA CGTCAGTTTC
TCGTATCCAG GCAGCCAGGC CAAGGCACTC GACAACGTCT CGTTCGAGAT CAAGCCGGGA
GAGAAGGTCG GCATCATCGG CAGGGTGGGA TCGGGCAAAA CCACTGTCGG ACGGCTGGCG
ACCGCATTCT ATCCGCCGAG CGAAGGCACC ATCCTGATCG ACGGCATCGA CATCCGACAA
TACGACCCTG CCGATCTGCG GGCCGGGATC GGCTTCGTGC TGCAGGACAC GGATCTGTTC
TACGGCAAAT TGCGCGACAA CATCGCGCTC GGCCGTCCGG CCGCGACCGA CGAAGAGGTG
CTGGAGGCCG CGAGGCTTGC CGGCGTCGAG AGCTTCATCG CCGGCCATCC GCAAGGCTAC
GAGATGATGA TCGCCGAGGG CGGCCGCAGC CTGTCCGGTG GCCAGAAGCA GGCGATTGGG
CTCGCGCGGG TGCTGATCCG TAAGCCTCGC GTGCTGTTTC TCGACGAACC GACCGCGCAT
TTCGATGTCC GTAGCGAGGG CGAGTTCCTG GACCGGCTGA AGGCGCTGGC CAAGGAGGAG
ATGACCATCA TCGTGTCCAC CCATCGTCCC TCGTTGCTGT TGCTGGTCGA TCGGATCCTG
GTGTTCGACT CCGGCAAATT GATCGCCGAC GGTCCGACCC AGCAGATCTT GACCAAGTTG
CGTCCACCGT CGTCGTCCGC GGCGCGAAGA TAG
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| Protein sequence | MNVRSVKVGP EEALPVEQVS ADVPPADSLS DSLLYLAAHH GRALSRSALL SGLPLERYGL
GLSLYERAAQ RAGLEAQLVE RPLHEIPSLV LPCVLLFHDG STRVMLAMDE AAGRVSIVDP
SRGNGPATAP IEAVAARYVG FAYLIRPAGM ADARTGAAGD LPKTHWFWSV VSRFGANYGL
VAIAAFIVNI LALAAPLFIM SVYDRVIPNG AIPSLVALGG GLALAIGFDF LLKVVRSRII
DMTGKQIDVV LAADIFEHIM ALKMDKRPPS VGILANQMRD FDSVREFFTS GTVVSATDML
FAILFIAVLF IIAGPIAWIP LLMLPIMIGV GLLIQRPLDR AMRRMQAESA ARHGILVEAL
NGIETVRAVG GEGRVQTVWE RSVAATARSS EEVQFWASLA LTTASAASQL CSLLLVVAGV
FLILDGKLSV GALIAANMLS ARILGPIAGI AAVMTRATQT TSALRSIDRL MGLERERPPE
KIYVAREIKD GRIQFKDVSF SYPGSQAKAL DNVSFEIKPG EKVGIIGRVG SGKTTVGRLA
TAFYPPSEGT ILIDGIDIRQ YDPADLRAGI GFVLQDTDLF YGKLRDNIAL GRPAATDEEV
LEAARLAGVE SFIAGHPQGY EMMIAEGGRS LSGGQKQAIG LARVLIRKPR VLFLDEPTAH
FDVRSEGEFL DRLKALAKEE MTIIVSTHRP SLLLLVDRIL VFDSGKLIAD GPTQQILTKL
RPPSSSAARR
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