Gene RPB_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1628 
Symbol 
ID3909905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1834782 
End bp1835552 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID637883523 
ProductABC transporter related 
Protein accessionYP_485248 
Protein GI86748752 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.387649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGC AAGGCAGCGA TCCGATCATC CGGGTCCGCG ACGTCTCGGT GCAGTTCGGT 
GCCACCAAGG TGCTGGACAA TCTCGATCTC GACGTCCGCC GCGGCGAGAT CCTCGGCTTC
GTCGGCCCGT CCGGCGCCGG CAAATCGGTG CTGACTCGGA CCATCATCGG GCTGGTGCCG
AAGCTGAGCG GGCGGATCGA GGTGTTCGGC ATCGACCTCG ACGCCGCCGG CAAGGCCGAG
CGACGCGGCA TCGAACGGCG CTGGGGCGTG CTGTTCCAGC AGGGCGCGCT GTTCTCGTCG
CTGACGGTGC GGCAGAACAT CCAGTTTCCG GTGCGGGAAT ATCTCAAGCT GTCGCAGCGG
CTGCTCGACG AGATCGCCAT CGCCAAGCTG GTGATGGTCG GTCTCAAGCC GGAGGTGGCC
GACCGCTACC CGTCAGAGCT GTCGGGCGGC ATGATCAAGC GCGTGGCGCT GGCCCGGGCG
CTGGCGCTCG ATCCGGAACT GGTGTTCCTC GACGAGCCGA CCTCCGGCCT CGACCCGATC
GGCGCCGGCG AGTTCGACGA GCTGGTCCGC ACCCTGCAGC GCACTTTGGG TCTCACCGTT
TTCATGGTAA CTCACGACCT CGACAGCCTG CACACCGCGT GCGACCGGAT CGCCGTGCTC
GGCGACGGCA AGGTGATCGC GGCCGGCTCG ATGGCCGAGA TGCAGGCGTC GCAGCATCCG
TGGCTGCGGT CCTATTTCCA CGGCAAGCGC GCCCGTGCGG TGGTCGGTTA A
 
Protein sequence
MAEQGSDPII RVRDVSVQFG ATKVLDNLDL DVRRGEILGF VGPSGAGKSV LTRTIIGLVP 
KLSGRIEVFG IDLDAAGKAE RRGIERRWGV LFQQGALFSS LTVRQNIQFP VREYLKLSQR
LLDEIAIAKL VMVGLKPEVA DRYPSELSGG MIKRVALARA LALDPELVFL DEPTSGLDPI
GAGEFDELVR TLQRTLGLTV FMVTHDLDSL HTACDRIAVL GDGKVIAAGS MAEMQASQHP
WLRSYFHGKR ARAVVG