Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1628 |
Symbol | |
ID | 3909905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1834782 |
End bp | 1835552 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883523 |
Product | ABC transporter related |
Protein accession | YP_485248 |
Protein GI | 86748752 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.387649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGC AAGGCAGCGA TCCGATCATC CGGGTCCGCG ACGTCTCGGT GCAGTTCGGT GCCACCAAGG TGCTGGACAA TCTCGATCTC GACGTCCGCC GCGGCGAGAT CCTCGGCTTC GTCGGCCCGT CCGGCGCCGG CAAATCGGTG CTGACTCGGA CCATCATCGG GCTGGTGCCG AAGCTGAGCG GGCGGATCGA GGTGTTCGGC ATCGACCTCG ACGCCGCCGG CAAGGCCGAG CGACGCGGCA TCGAACGGCG CTGGGGCGTG CTGTTCCAGC AGGGCGCGCT GTTCTCGTCG CTGACGGTGC GGCAGAACAT CCAGTTTCCG GTGCGGGAAT ATCTCAAGCT GTCGCAGCGG CTGCTCGACG AGATCGCCAT CGCCAAGCTG GTGATGGTCG GTCTCAAGCC GGAGGTGGCC GACCGCTACC CGTCAGAGCT GTCGGGCGGC ATGATCAAGC GCGTGGCGCT GGCCCGGGCG CTGGCGCTCG ATCCGGAACT GGTGTTCCTC GACGAGCCGA CCTCCGGCCT CGACCCGATC GGCGCCGGCG AGTTCGACGA GCTGGTCCGC ACCCTGCAGC GCACTTTGGG TCTCACCGTT TTCATGGTAA CTCACGACCT CGACAGCCTG CACACCGCGT GCGACCGGAT CGCCGTGCTC GGCGACGGCA AGGTGATCGC GGCCGGCTCG ATGGCCGAGA TGCAGGCGTC GCAGCATCCG TGGCTGCGGT CCTATTTCCA CGGCAAGCGC GCCCGTGCGG TGGTCGGTTA A
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Protein sequence | MAEQGSDPII RVRDVSVQFG ATKVLDNLDL DVRRGEILGF VGPSGAGKSV LTRTIIGLVP KLSGRIEVFG IDLDAAGKAE RRGIERRWGV LFQQGALFSS LTVRQNIQFP VREYLKLSQR LLDEIAIAKL VMVGLKPEVA DRYPSELSGG MIKRVALARA LALDPELVFL DEPTSGLDPI GAGEFDELVR TLQRTLGLTV FMVTHDLDSL HTACDRIAVL GDGKVIAAGS MAEMQASQHP WLRSYFHGKR ARAVVG
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