| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1604 |
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| Symbol | |
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| ID | 3910075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1807772 |
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| End bp | 1809727 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883500 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_485225 |
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| Protein GI | 86748729 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.43289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTG GGATCCGTTC ATTTTCGTAT CGCAACTGGA TGATCGCAAT TCACGACGCC
GTTGCGACCG CGGTTGCGGT TCTGCTGAGT TTTTTCCTGC GCTTCGACGG CGAAAATCTG
CTGGACCGGC TGCCGTTGCT GCTCTGGATA CTGCCTTACT TCGTCGTCTT CAGTTTTTTC
GTTTGTTACG CCTTTCAGCT GACCACGACG AAATGGCGAT TCATCTCGAT TCCCGATCTG
CTCAACATCA TACGGGCGGC AAGCGTTCTC ACGCTTGCGC TGCTCGTGAT GGACTACATC
TTCCTCGCCC CGAACGTTTA CGGTTCCTTC TTCCTGGGCA AGACGACCAT CGTCATCTAT
TGGGTGCTCG AGGTCTTCCT TCTGTCCGGC TCGCGGATCG CGTATCGCTA TTTCCGCTAC
ACGCGCACGC GCAACAAGGC CCACCAGTTG GACGCCGCGC CGGCGGTGCT GATCGGCCGT
GCTGCCGACG CCGAGGTGCT GTTGCGCGGG ATCGAAAGCG GCGCCGTCAA GCGGTTGTGG
CCGGTCGGGA TCCTTTCGCC CGCCAGATCG GATCGAGGGC AAACCATCCG CGGAATCCCC
GTGCTGGGCG GGATCGACGA TCTGCCCAAC GTGGTCGAGG ACTTCGCTCA TCGCAAGCGG
CCGATCGAGC GCGTGGTGAT GACGCCGTCG GCATTCGAGG CCGACGCCAA GCCGGAAGCG
GTGCTGATGC GGGCACGCAA GCTGGGGCTC GCCGTCAGCC GTCTTCCATC GCTGGGGGAA
AGTCGGGACA CCCCCCGCCT CTCGCCGGTG GCGGTGGAGG ATCTGCTGCT GCGGCCCAGC
GTCGATATCG ACTATGGTCG GCTCGAGAAT CTGCTCAACG GCAAATCCAT CGTCGTCACC
GGCGGTGGCG GCTCGATCGG ATTGGAGATG TGCGATCGGG TGACCACCTT CGGAGCCGCG
CGCCTTCTCG TGATCGAGAA CTCGGAGCCG GCCCTGTACG CGGCGATGGA GGCGCTCTCC
ACCAAGATCA CCAAGACCAA GATCGACGGC CATATCGCCG ACATTCGCGA TCGCGCGCGG
ATCTTTCAGC TCATCATCGA ATTCCAGCCG GATCTGGTCT TTCACGCCGC GGCGCTGAAG
CACGTCCCGA TCCTCGAACG CGACTGGGGT GAAGGCGTCA AGACCAACAT CTTCGGCTCG
GTGAATGTCG CGGATGCGGC ACGCGCCGCC AACGCCCAAG CGATGGTGAT GATCTCGACC
GACAAGGCGA TCGAGCCGGT GTCGATGCTG GGTCTCACCA AACGATTCGC CGAATTGTAC
TGCCAGGGAA TCGATCGTGA ACTCTCCGGC GCCGCGGGCG ACGAGCCGGC GATGCGCCTG
ATCTCCGTGC GCTTCGGAAA CGTCCTGGCA TCGAACGGCT CGGTGGTACC GAAGTTCAAG
GCGCAGATCG AAGCCGGCGG GCCGGTGACG GTGACGCATC CCGACATGGT GCGTTACTTC
ATGACGATCC GCGAAGCCTG CGATCTGGTG ATTACCGCCG CCACCCACGC GCTGAATCCG
CAACATGCCG ACGCTTCGGT ATTCGTTCTG AGCATGGGGC AGCCGGTGAA GATCGTCGAT
CTCGCGGATC GGATGATCCG GCTGTCCGGC CTGCAACCGG GCTACGACAT CGACATCGTC
TTCACCGGCG TGAGGCCGGG CGAGCGGATG CACGAGATCC TGTTCGCCGA GCACGAATCC
TTCATCGAGA TCGGGCTTCC CGGTGTGGTC GCCGCACGAC CGAAGGAATT GCCATTGAAG
ACGCTGCGGC AATGGCTGAC CGAACTTGAG AAGGCCACAA CCGAAGGGCG CTACGACTGC
GTCGTTGCCA TTCTCAAGGA CGCGGTTCCG GAGTATCAGG CCGGCGACGC CGCCCAGGAC
CAGAACAGCA GTGCGTCAGG CAAGTTAGCT TTGTGA
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| Protein sequence | MLTGIRSFSY RNWMIAIHDA VATAVAVLLS FFLRFDGENL LDRLPLLLWI LPYFVVFSFF
VCYAFQLTTT KWRFISIPDL LNIIRAASVL TLALLVMDYI FLAPNVYGSF FLGKTTIVIY
WVLEVFLLSG SRIAYRYFRY TRTRNKAHQL DAAPAVLIGR AADAEVLLRG IESGAVKRLW
PVGILSPARS DRGQTIRGIP VLGGIDDLPN VVEDFAHRKR PIERVVMTPS AFEADAKPEA
VLMRARKLGL AVSRLPSLGE SRDTPRLSPV AVEDLLLRPS VDIDYGRLEN LLNGKSIVVT
GGGGSIGLEM CDRVTTFGAA RLLVIENSEP ALYAAMEALS TKITKTKIDG HIADIRDRAR
IFQLIIEFQP DLVFHAAALK HVPILERDWG EGVKTNIFGS VNVADAARAA NAQAMVMIST
DKAIEPVSML GLTKRFAELY CQGIDRELSG AAGDEPAMRL ISVRFGNVLA SNGSVVPKFK
AQIEAGGPVT VTHPDMVRYF MTIREACDLV ITAATHALNP QHADASVFVL SMGQPVKIVD
LADRMIRLSG LQPGYDIDIV FTGVRPGERM HEILFAEHES FIEIGLPGVV AARPKELPLK
TLRQWLTELE KATTEGRYDC VVAILKDAVP EYQAGDAAQD QNSSASGKLA L
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