Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1595 |
Symbol | |
ID | 3910066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1797960 |
End bp | 1798661 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883491 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_485216 |
Protein GI | 86748720 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0258596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CTACTTACGT GATCGCTCCG CTGCCGCAGC CCGCGCTCGC CGTGCAGGGC GACAGCAAGA TGTTTCCGGT GCGCCGGATC TGGTGCGTCG GGCGCAACTA TCTCGAGCAC ATCCGCGAGC TCGGCAATGA CGAGCGCAAC CCGCCGTTCT TCTTCGCCAA GCACGCCGAC ATGATCGCGC CGGACGGCGC CACGATCCCC TACCCGACGC TGACCAAGGA CTTCCAGCAC GAGGTCGAGC TCGTCGTCGC GCTGAAGAGC GGCGGGCTGA ACATTTCGGC CGACACCGCG CTCGATCACG TGTTCGGCTA CGGCGTCGGC GTCGATCTGA CGCGGCGGGA TCTGCAGACG ATCTCGCGCA AGAAGGAGCA GCCCTGGGAG ATCGGCAAAT CGTTCGATGC TTCCGCGCCC TGCGGCGCGC TGCGGCCGGC GGCGGAGATC GGCCATCCGG CCAAGGGCAA GATCTGGCTG TCGGTCAACG GCGCGGAGCG GCAGAGCGGC GACCTGTCGG ACATGATCTG GAACACTGCC GAGATCATCG CCAAACTTTC GCTGCAGGTC GAACTTTCCG CCGGCGACAT CATCATGACA GGTACCCCTG CGGGCGTCGC GGCGCTCGTG CCGGGCGACG AGGTCGACTG CGGCATCGAC GGCATCGGCA CGCTCCGCGT GACGATCGGC GAGCCGACCT GA
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Protein sequence | MSQATYVIAP LPQPALAVQG DSKMFPVRRI WCVGRNYLEH IRELGNDERN PPFFFAKHAD MIAPDGATIP YPTLTKDFQH EVELVVALKS GGLNISADTA LDHVFGYGVG VDLTRRDLQT ISRKKEQPWE IGKSFDASAP CGALRPAAEI GHPAKGKIWL SVNGAERQSG DLSDMIWNTA EIIAKLSLQV ELSAGDIIMT GTPAGVAALV PGDEVDCGID GIGTLRVTIG EPT
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