Gene RPB_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1595 
Symbol 
ID3910066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1797960 
End bp1798661 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637883491 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_485216 
Protein GI86748720 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0258596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CTACTTACGT GATCGCTCCG CTGCCGCAGC CCGCGCTCGC CGTGCAGGGC 
GACAGCAAGA TGTTTCCGGT GCGCCGGATC TGGTGCGTCG GGCGCAACTA TCTCGAGCAC
ATCCGCGAGC TCGGCAATGA CGAGCGCAAC CCGCCGTTCT TCTTCGCCAA GCACGCCGAC
ATGATCGCGC CGGACGGCGC CACGATCCCC TACCCGACGC TGACCAAGGA CTTCCAGCAC
GAGGTCGAGC TCGTCGTCGC GCTGAAGAGC GGCGGGCTGA ACATTTCGGC CGACACCGCG
CTCGATCACG TGTTCGGCTA CGGCGTCGGC GTCGATCTGA CGCGGCGGGA TCTGCAGACG
ATCTCGCGCA AGAAGGAGCA GCCCTGGGAG ATCGGCAAAT CGTTCGATGC TTCCGCGCCC
TGCGGCGCGC TGCGGCCGGC GGCGGAGATC GGCCATCCGG CCAAGGGCAA GATCTGGCTG
TCGGTCAACG GCGCGGAGCG GCAGAGCGGC GACCTGTCGG ACATGATCTG GAACACTGCC
GAGATCATCG CCAAACTTTC GCTGCAGGTC GAACTTTCCG CCGGCGACAT CATCATGACA
GGTACCCCTG CGGGCGTCGC GGCGCTCGTG CCGGGCGACG AGGTCGACTG CGGCATCGAC
GGCATCGGCA CGCTCCGCGT GACGATCGGC GAGCCGACCT GA
 
Protein sequence
MSQATYVIAP LPQPALAVQG DSKMFPVRRI WCVGRNYLEH IRELGNDERN PPFFFAKHAD 
MIAPDGATIP YPTLTKDFQH EVELVVALKS GGLNISADTA LDHVFGYGVG VDLTRRDLQT
ISRKKEQPWE IGKSFDASAP CGALRPAAEI GHPAKGKIWL SVNGAERQSG DLSDMIWNTA
EIIAKLSLQV ELSAGDIIMT GTPAGVAALV PGDEVDCGID GIGTLRVTIG EPT