Gene RPB_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1589 
Symbol 
ID3910060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1790547 
End bp1791962 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content64% 
IMG OID637883485 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_485210 
Protein GI86748714 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA AGTTCACCGA TTACATCGTC AAGGACATCG GCCTCGCCGA GTTCGGCCGC 
AAGGAGATCT CGCTGGCCGA GACCGAAATG CCCGGCCTGA TGGCGACGCG CGAGGAATAC
GGCCCCAAGC AGCCCCTGAA GGGCGCGCGG ATCGCCGGCT CGCTGCACAT GACGATCCAG
ACCGCGGTGC TGATCGAGAC GCTGGTCGCG CTCGGCGCCG ACGTGCGCTG GGTGTCGTGC
AACATCTATT CGACCCAGGA CCACGCCGCC GCGGCGATCG CCGCCGCCGG CATTCCGGTG
TTCGCCATCA AGGGCGAGAG CCTGGAAGAC TATTGGGACT ACACCGCCCG GATGTTCGAC
TGGCACGGCG GCGGCACCCC GAACATGATC CTCGATGACG GCGGCGACGC CACCATGTAC
GTCCATCTCG GCCTGCGCGC CGAGAACGGC GACACCGCCT TCCTCGACAA GCCCGGCTCC
GACGAGGAGG TGATCTTCTT CGCGCTCTTG AAGAAGCAGC TCAAGGAGAA GCCGAAGGGC
TACTTCGCCG AGATCGCCAA GAACATCCGG GGCGTCTCCG AAGAGACCAC CACGGGCGTG
CACCGGCTCT ACGACATGCA GAAGGCCGGC ACGCTGCTGT GGCCGGCCAT CAACGTCAAC
GACTCGGTCA CCAAGTCGAA ATTCGACAAC CTCTATGGCT GCCGTGAGTC GCTGGTCGAC
GGCATCCGCC GCGGCACCGA CGTGATGCTG TCCGGCAAGG TGGCGATGGT CGCGGGCTTC
GGCGACGTCG GCAAGGGCTC GGCCGCCTCG CTGCGCCAGG CCGGCTGCCG TGTGATGGTG
TCCGAAGTCG ATCCGATCTG CGCGCTGCAG GCGGCGATGG AAGGCTATCA GGTCGTGACC
ATGGAAGACG CGGCGCCGCT CGCCGACATC TTCGTCACCG CCACCGGCAA CAAGGACATC
ATCACCATCG AGCACATGCG CGCGATGAAG GATCGCGCCA TCGTCTGCAA CATCGGCCAT
TTCGACAACG AGATCCAGAT CGCGCATCTC AAGAACCTGA AGTGGGACAA CATCAAGCCG
CAGGTCGACG AGATCACCTT CCCGGACGGC AAGCGCATGA TCCTGCTGTC CGAAGGCCGC
CTCGTGAACC TCGGCAACGC GATGGGGCAT CCGTCCTTCG TGATGTCGGC CTCCTTCACC
AACCAGACGC TGGCGCAGAT CGAACTGTTC GCCAACAACA AGGACGGCAA GTACAAGAAG
GAAGTCTACG TCCTGCCGAA GTCGCTGGAT GAGAAGGTCG CCCGCCTGCA CCTCGCCAAG
ATCGGCGTCA AGCTCACCGA ACTGCGCAAG GACCAGGCCG ACTACATCGG CGTCAAGGTC
GAGGGGCCGT TCAAGGCGGA TCATTACCGG TATTGA
 
Protein sequence
MTAKFTDYIV KDIGLAEFGR KEISLAETEM PGLMATREEY GPKQPLKGAR IAGSLHMTIQ 
TAVLIETLVA LGADVRWVSC NIYSTQDHAA AAIAAAGIPV FAIKGESLED YWDYTARMFD
WHGGGTPNMI LDDGGDATMY VHLGLRAENG DTAFLDKPGS DEEVIFFALL KKQLKEKPKG
YFAEIAKNIR GVSEETTTGV HRLYDMQKAG TLLWPAINVN DSVTKSKFDN LYGCRESLVD
GIRRGTDVML SGKVAMVAGF GDVGKGSAAS LRQAGCRVMV SEVDPICALQ AAMEGYQVVT
MEDAAPLADI FVTATGNKDI ITIEHMRAMK DRAIVCNIGH FDNEIQIAHL KNLKWDNIKP
QVDEITFPDG KRMILLSEGR LVNLGNAMGH PSFVMSASFT NQTLAQIELF ANNKDGKYKK
EVYVLPKSLD EKVARLHLAK IGVKLTELRK DQADYIGVKV EGPFKADHYR Y