Gene RPB_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1588 
Symbol 
ID3910059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1789110 
End bp1790306 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content66% 
IMG OID637883484 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_485209 
Protein GI86748713 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGT CTTATCTGTT CACGAGTGAG TCGGTGTCGG AAGGTCATCC GGACAAGGTC 
TGCGACCGGA TTTCCGACGA GGTGGTCGAT CTGTTCTTCC GCGAGGGGCC GAAAGCCGGC
ATCGATCCGT GGGCGATTCG GGCGGCGTGC GAGACGCTCG CCACCACCAA CAAGGTGGTG
ATCGCCGGCG AGACCCGCGG TCCGGCCTCG GTCACCAACG ACCAGATCGA GAGCGTCGTC
CGCGCCGCCA TCAAGGACAT CGGCTACGAG CAGGAAGGCT TCCACTGGGA CACCTGCGAC
ATCGAGATCC TGCTGCATCC GCAATCGGCG GACATCGCGC AGGGCGTCGA CGCGCTGCAG
CCCGGCACCA ACAAGGAAGA GGGCGCCGGC GACCAGGGCA TCATGTTCGG CTACGCCACC
AACGAGACGC CCGATTTGAT GCCGGCGCCG ATCTTCTACG CCCACAAGAT CCTGCGGCTG
ATCTCGGAAG CCCGCCACTC CGGCAAGGAG AAGGTGCTGG GCCCCGACAG CAAGAGCCAG
GTCACCATCC AGTACGAGAA CGGCAAGCCG GTCGGCGTCC GCGAGATCGT GGTGTCGCAC
CAGCATCTGG TCGAGGACAT GACCTCGAAC CAGGTCCGCG AGCGGGTCGA GCCCTATGTC
CGCCAGGCGC TGCCGGACGG CTGGATCACC GACAAGACGA TCTGGCACAT CAATCCCACC
GGCAAGTTCT ACATCGGCGG CCCGGACGGC GACACCGGCC TGACCGGCCG CAAGATCATC
GTCGACACCT ATGGTGGCGC GGCCCCGCAT GGCGGCGGCG CGTTCTCCGG CAAGGACCCG
ACCAAGGTCG ACCGCTCGGC CGCCTATGCG TCGCGCTACC TCGCCAAGAA CATCGTCGCG
GCCGGCCTCG CCGACCGCTG CACCCTGCAG CTCGCTTACG CCATCGGCGT GGCGCGGCCG
CTGTCGATCT ACATCGACAC CCACGGCACC GGGAAGGTTT CGGAAGACAA GCTGGAGAAG
GCGGTCGCCG AGGCGATGGA CCTGACGCCG CGCGGCATCC GCAGCCATCT CGACCTCAAC
AAGCCGATCT ACGCCCGGAC CTCGTCCTAC GGCCATTTCG GCCGCACCCC GGACGCCGAC
GGCGGCTTCT CCTGGGAGAA GACCGATCTT GCCGACGCGC TCAAGCGCGC GGTTTAA
 
Protein sequence
MRASYLFTSE SVSEGHPDKV CDRISDEVVD LFFREGPKAG IDPWAIRAAC ETLATTNKVV 
IAGETRGPAS VTNDQIESVV RAAIKDIGYE QEGFHWDTCD IEILLHPQSA DIAQGVDALQ
PGTNKEEGAG DQGIMFGYAT NETPDLMPAP IFYAHKILRL ISEARHSGKE KVLGPDSKSQ
VTIQYENGKP VGVREIVVSH QHLVEDMTSN QVRERVEPYV RQALPDGWIT DKTIWHINPT
GKFYIGGPDG DTGLTGRKII VDTYGGAAPH GGGAFSGKDP TKVDRSAAYA SRYLAKNIVA
AGLADRCTLQ LAYAIGVARP LSIYIDTHGT GKVSEDKLEK AVAEAMDLTP RGIRSHLDLN
KPIYARTSSY GHFGRTPDAD GGFSWEKTDL ADALKRAV