| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1575 |
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| Symbol | |
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| ID | 3908774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1773582 |
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| End bp | 1776026 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883471 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_485196 |
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| Protein GI | 86748700 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.889584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC TGCCGCTGTC GGAATTGCGC GTCGTGGAAT TGGGATCCGG CGACGCGCTC
GCATACTGCG GCAAGCTGTT CGCCGATTTC GGCGCGGAGG TCGTCAAGGT CGAGCCGCCG
GGCGGCGATC CAGACCGGCA GGTCGCACCG CGGGTCGAGC GCGGCGGAGG GCGCGAGAGC
GCCAGCTTCG CCTGGCTGAA CAGCAACAAG CGCAGCGTCA CCGCGAAGCT CGACGATCCG
GCCGGTGTGG TGCGGATCGA ACGCTTACTT GCGGACGCCG ACCTGCTGCT CGACGCCCGG
CATCCGGTCG AGATCGAGGC TTCGACGCTG TCGCATCGCC GTCTGCGTGA AACGCAGCCC
GGCCTCGCTA TCACCGCGCT GTCGTGGTTC GGCGAACACG GCCCGTATCG CGATTATCTG
GCGACCGATG CGGTCTGCCG CAGCCTCGCC GGGCTGGTGA AACTGGTCGG CCCGGCGGAA
GGCCCACCGG TGCTGCCGCG CGACGGCCAG ACCGCGGTGA TCGCCGGCCT CACCGCCTTC
ATCCCGACGC TCGCCGGATT GTTCGCCCGC GCCGATCAGG GCGCGCGCCG GTTCGCGGTC
AACGCCTTCG AGGCGACGCT GCAGATCGCC GAATTCGACA TCGCGCTGGC GCTGGAGGCC
GGCTCGACGC GGCCGCGGAT CGGGCTGAAC CGGTTCGGCC GCGGCTTTCC GGTCGGCAAC
TACGCGACCA AGGACGGCTG GCTCGGCGTC ACCGTGGTGA CGCCGGCGCA ATGGCTCGGC
TTCTGCGCGA TGATCGGCCT GCCGGAGCTG GGCCCCGATC CGCGCTATTC GGCGACCAAT
GATCGCTTCA TCCATGCCGA CGAACTCAAC TCGATCATCC GGCCGGTGCT GATGCACAGG
ACCGCGATGG ACTGGTTCGA GCGCGGCCTC GCGTTGCGGC TGCCGCTGGC GCTGGTGCCG
GACATGGCGC AATTGCTGGC GCAGCCGGTG ATGCGCGAAC GCGGCGCCTT CGCCACCGTC
GAGATCGGCA CGGCGTCGTT CGAGGCGCCG GTGCTGCCGC AGCGGCTGAC GGCATCGCCC
GGCAAGCCCA ATGGCCGCGC GCCGCTGTGC GGCGAGCACG ATGGCGTGGA GCTGTCGCCG
CATCGGCGGA TCGCAGATCG CGCAGCAGGC GCGAGCGAGG CGTTGCCGCT GTCAGGCATT
CGCATCGTCG ATCTCACCAT GGGCTGGGCC GGGCCATCGG CGGTGCGCCA GCTCGGCGAT
CTCGGCGCCG ATATCGTCAA GGTGGAGTCG TGCCAGTATC CGGACTGGTT CCGCGGCACC
GATCCGCGCG GGCCGTATCA TCCCGAACGC ACTTACGAGA AGACCTACTG GTTCCAGACG
ATGAACCGCA ACAAGCGCGG CATCACGCTG GATCTGACCA CCGCAGACGG CCGCGCGGCG
CTGACGAAAC TACTCGCCGG CGCCGATGCG GTGATCGACA ATTACGCCGC CGACGTGCTG
CCGCGGCTCG GCCTCGACGT CGCCGCGATG CAGGCGATCA ATCCGCGGCT GGTGATCGTG
ACGATGCCGG CCTTCGGCCT GACCGGCCGC TGGAGCGCCG CCCGCGCCTA TGGCTCGACG
CTGGAACAGG CGTCCGGGCT GCCGTCGGTG ACCGGCCGCG ACGGCGATCC GCCGACGATG
CAGCACGCCG CGCTCGGCGA TCCGGTCGGC GGACTGAACG CCGCCGCCGC GCTGATGCTC
GGCCTGACGT ATCAACAGCG CACCGGCGAC GGCCAGCACA TCGATCTGTC GCAGGTCGAA
TGCATGTTGC CGATGCTGGC GTCCTCGATC ATCGAACAAT CGGTGACGGG ACACACCGGC
CCGCGGCTCG GCAACCGGCA TCCGCGCTTC GTGCCGAGCG GTTGCTTCCC CTGCGCCGGC
GAGGATCAGT GGGTGACGCT GGTGGTGCAG AGCGACGCGC AATGGGCGGC GCTGTGCCGG
GTGATGCACC GGCCGGATCT CGCCCACGAT CCCGCGCTCG CCACCGCCGA TGGCCGCCGC
GCCGACGAGG ATCGCATCGA GGTCGCGGTC CGGCACTGGA CCTCGACCGT CCGGCCGGAA
CTGGCGATGG TGACGCTGCA GGAGGCCGCC ATCGCCGCCG GCGTCGCGCG GCTGCCGGTC
GATCTGGTCG GCGATGCGCA TCTGCTCGCG ACCGGGCACT GGCAGCCGGT GGTGCGGCCG
TTCATGGGGC CGCATCTGCT GCCGTCGGTG TCGTATCGCG AAGGCTTCGC CGAACGGCCC
TACCCGATCG AACGGCTGGC TCCCACCCTC GGCCAGCATA ATCATGAGGT GCTGCGGGAG
ATCGGACTCA CCGAGGCCGA GATCGGTGAC CTGCACGATC GCGGCGTGAT CGGGCGAGTG
GCGACTGCCA AAAAGAGCGG CGGCGCCCGC CAGGCGGCCG AATGA
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| Protein sequence | MQALPLSELR VVELGSGDAL AYCGKLFADF GAEVVKVEPP GGDPDRQVAP RVERGGGRES
ASFAWLNSNK RSVTAKLDDP AGVVRIERLL ADADLLLDAR HPVEIEASTL SHRRLRETQP
GLAITALSWF GEHGPYRDYL ATDAVCRSLA GLVKLVGPAE GPPVLPRDGQ TAVIAGLTAF
IPTLAGLFAR ADQGARRFAV NAFEATLQIA EFDIALALEA GSTRPRIGLN RFGRGFPVGN
YATKDGWLGV TVVTPAQWLG FCAMIGLPEL GPDPRYSATN DRFIHADELN SIIRPVLMHR
TAMDWFERGL ALRLPLALVP DMAQLLAQPV MRERGAFATV EIGTASFEAP VLPQRLTASP
GKPNGRAPLC GEHDGVELSP HRRIADRAAG ASEALPLSGI RIVDLTMGWA GPSAVRQLGD
LGADIVKVES CQYPDWFRGT DPRGPYHPER TYEKTYWFQT MNRNKRGITL DLTTADGRAA
LTKLLAGADA VIDNYAADVL PRLGLDVAAM QAINPRLVIV TMPAFGLTGR WSAARAYGST
LEQASGLPSV TGRDGDPPTM QHAALGDPVG GLNAAAALML GLTYQQRTGD GQHIDLSQVE
CMLPMLASSI IEQSVTGHTG PRLGNRHPRF VPSGCFPCAG EDQWVTLVVQ SDAQWAALCR
VMHRPDLAHD PALATADGRR ADEDRIEVAV RHWTSTVRPE LAMVTLQEAA IAAGVARLPV
DLVGDAHLLA TGHWQPVVRP FMGPHLLPSV SYREGFAERP YPIERLAPTL GQHNHEVLRE
IGLTEAEIGD LHDRGVIGRV ATAKKSGGAR QAAE
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