| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1574 |
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| Symbol | |
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| ID | 3908773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1772103 |
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| End bp | 1773332 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883470 |
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| Product | ABC transporter, periplasmic branched chain amino acid binding protein |
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| Protein accession | YP_485195 |
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| Protein GI | 86748699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.760294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.703114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT TGATCGCTGC CATGGTGATT GCGCTGCCGA TGTTCGGCTC CGCGGCGCTG
GCCCAGGAAA CCGTCAAGAT CGGCTATATC GATCCGCTGT CCGGCGGCGG CGCCAGCGTC
GGCGAAGGCG GCCTCAAGAC CTTCCAGTAT CTCGCCGACG AGCTCAACGC CAAGGGCGGC
ATTCTCGGCA AGAAGGTCGA GATCGTTCCG CTCGACAACA AGACCAACCC GCAGGAAAGC
CTGATCCAGG CGCAGAAGGC GATCGATTCC GGCGTCCGCT ACATCACCCA GGGCAACGGT
TCCTCGGTCG CCGGCGCGCT GGCGGACTTC GTCACCAAAT ACAACGAGCG CAACCCCGGC
AAGGAAGTGC TGTACTTCAA TTACGCCGCG GTCGACCCGG TGCTGACCAA CGAAAAGTGC
AGCTTCTGGC ACTTCCGCTG GGACGCGAAT TCCGACATCA AGATGGAAGC GCTGACCAAC
TACATGAAGG ATCAGCCTTC GATCAAGAAA GTCTATCTGA TCAATCAGGA CTATTCGTTC
GGCCAGTCGG TCCGCACCAC CGCCCGGGCG ATGCTGTCCA AGAAGCGCTC GGACATCCAG
ATCGTCGGCG ACGAACTGCA TCCGCTGCTG AAGATCACCG ACTTCGCCCC CTACATCGCC
AAGATCAAGG CGTCCGGCGC CGACACCGTG GTGACCGGCA ATTGGGGCCA GGACATCGCG
CTGCTGCTCA AGGCCGCCGC CGATGCCGGC CTCAAGGTGA GCTGGTACAC CTATTACGCC
GGCGGCGCCG GCGGCCCGAC TGCGATCAAG CAGACCGGCC TCAACCACCA GGTGTTCCAG
ATCACCGAAG GCTTCGCCAA CGTCGCCCAC AAGGAATCGC AGGACTTCGA AAAGGCGTTC
CGCGCCAAGG TCGACCTGAG CCTGTGGTAC CCGCGCGCCG TCAACGAAAT GCGGATGTTC
GCCGCCGCGG CCGATAAGGC CAAGTCGGTC GATCCGGTCA AGGTCGCTCA GGCGCTCGAG
GGCATGAAGT TCGAAGTGTT CAACGGCGGC CAGGGTGAAA TGCGGAAGGA CGACCACCAG
TTCTTCCAGC CGATCTACGT CTCGTCGTTC GGCGACATCC CGGCGGGCCA GTTCGACGAA
GAGAAGACCG GCTGGGGCTG GAAGCAGGTC GCCAAGATCG ACACCGCCCA GACCATGCTG
CCGACCACCT GCAAGATGGA CCGGCCGTAA
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| Protein sequence | MKRLIAAMVI ALPMFGSAAL AQETVKIGYI DPLSGGGASV GEGGLKTFQY LADELNAKGG
ILGKKVEIVP LDNKTNPQES LIQAQKAIDS GVRYITQGNG SSVAGALADF VTKYNERNPG
KEVLYFNYAA VDPVLTNEKC SFWHFRWDAN SDIKMEALTN YMKDQPSIKK VYLINQDYSF
GQSVRTTARA MLSKKRSDIQ IVGDELHPLL KITDFAPYIA KIKASGADTV VTGNWGQDIA
LLLKAAADAG LKVSWYTYYA GGAGGPTAIK QTGLNHQVFQ ITEGFANVAH KESQDFEKAF
RAKVDLSLWY PRAVNEMRMF AAAADKAKSV DPVKVAQALE GMKFEVFNGG QGEMRKDDHQ
FFQPIYVSSF GDIPAGQFDE EKTGWGWKQV AKIDTAQTML PTTCKMDRP
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