| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1572 |
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| Symbol | |
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| ID | 3908771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1769660 |
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| End bp | 1770961 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883468 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_485193 |
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| Protein GI | 86748697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.720427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TCGCTTCCCG CGTCGCGCCG CCGCGACCGG CGCTGTCCGA TCGCCTCAAA
TTCTACGGGG TCTGGATCGC CACAGCGCTG ACGCTGCTGC TGCTGCCGCA GATCTTCTCA
TCCGGCGGAT CGCTGACGAC CTTCAGCCTG GTCGGCATCT CGATCATCTT CGCCTTGTCC
TACAACATCC TGCTCGGCCA GACCGGCATG CTGTCGTTCG GCCACGCGGT GTATTACGGC
CTCGGCGGCT TCCTGGCGAT CCACGCCATC AATCTGCTCG GCGCCAACAA ATGGGCGATC
CCGCTGCCGC TGGTGCCGCT GATCGGCGGC ATGGCGGGGC TGTTCCTCGC GGCCCTGATC
GGCTGGGTGA TGACGCAGCG CTCGGGCACC GCGTTCGCGA TGATCTCGCT CGGCCTCGCC
GAACTGGTCG CCTCCTCGGC GCTGATCCTG CGCACCTTCT TCGGCGGCGA GGCCGGCATC
TCGGCCAACC GCACCAAGCT GTTCAAGGTG TTCGGGCTGT CCTTCGGGCC GCAGATCCAG
ATCTATTATC TGGTCGCCGC CTGGACGCTG ATCGCGATCA TCGCGATGTA CGCGCTGACC
CGGACGCCGC TCGGCCGGAT GTGCAACGCG GTCCGCGACA ATCCTGAGCG CGTGCAGTTC
GTCGGCTACG ACCCACACGT CGTGCGCTAT CTGGCGTTCT GCTTTGCGGG GTTCTTCGCC
GGCATCGCCG GCGCGCTCGC CGCGATCAAT TTCGAGATCG CCAACTCGGC CTATCTCGGC
GCGGTGCAGT CCGGCACCGT GCTGTTCGCG GCCTATATCG GCGGCATCGG CTTCTTCATC
GGCCCGATCG TCGGGGCGAT CTTCGTCACC ATCCTGTCGC TAGGCCTGTC CGACCTCACC
CAGGTCTGGC AATTGTATTT CGGCCTGTTC TTCATCGCCG TGGTGCTGTA CGCGCCCGGC
GGCATCACAG GCCTGTTGAT GATGCACCGG CCGCTGATCC GTGCCGGCAT GCTGTCGCGG
ATGCTGCCGA GCTATCTCAT CGCCGCGCTG CCGACGCTGG CGCTGGTCAC CGGGCTGATG
CTGATGATCG AGACCATCGT GCACTACACC GTCAATCCCC ACGAGGATCC CTACCGCAAG
GCGTTCGGCA TCCCGTTCGA CGCGGCGAGC CCGCTGACCT GGGCGATCTC CGCGGCGCTG
ATCGTGGGCG GCTTCTGGCT GTGCCGGATG GCCTGGGCCC GCGTCGGCCA GACCTGGGAC
GAGACCCTCA CCGCCGCCCG CGCCAAGGTG CATGCCCTAT GA
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| Protein sequence | MTDLASRVAP PRPALSDRLK FYGVWIATAL TLLLLPQIFS SGGSLTTFSL VGISIIFALS
YNILLGQTGM LSFGHAVYYG LGGFLAIHAI NLLGANKWAI PLPLVPLIGG MAGLFLAALI
GWVMTQRSGT AFAMISLGLA ELVASSALIL RTFFGGEAGI SANRTKLFKV FGLSFGPQIQ
IYYLVAAWTL IAIIAMYALT RTPLGRMCNA VRDNPERVQF VGYDPHVVRY LAFCFAGFFA
GIAGALAAIN FEIANSAYLG AVQSGTVLFA AYIGGIGFFI GPIVGAIFVT ILSLGLSDLT
QVWQLYFGLF FIAVVLYAPG GITGLLMMHR PLIRAGMLSR MLPSYLIAAL PTLALVTGLM
LMIETIVHYT VNPHEDPYRK AFGIPFDAAS PLTWAISAAL IVGGFWLCRM AWARVGQTWD
ETLTAARAKV HAL
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