Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1568 |
Symbol | |
ID | 3908767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1767329 |
End bp | 1767658 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883464 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_485189 |
Protein GI | 86748693 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.630321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGATT CGCTGGCCGA GATCGCGCCG GATTTCGCCC GCTATGTGAT CGAGTTTCCG TTCGGCGACA TCTACAGCCG CCCCGGCCTC GACCTGCGCG CCCGCGAGAT CGCGACCATC GCCGCCCTGA CCGCGATGGG CAACGCCACG CCGCAGCTCA AGGTCCATAT CGAGGCCGGG CTGAATGTCG GCCTCAGCCG CGCCGAGATC ATCGAGATCA TCATGCAGAT GGCGGTCTAT GCCGGATTCC CGGCGGCGCT GAACGGCCTG TTCGCAGCCA GGGACGTGTT CGCCGCGCGC ACGGCATCCG GTCAGGCGCC CGCGGCATGA
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Protein sequence | MIDSLAEIAP DFARYVIEFP FGDIYSRPGL DLRAREIATI AALTAMGNAT PQLKVHIEAG LNVGLSRAEI IEIIMQMAVY AGFPAALNGL FAARDVFAAR TASGQAPAA
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