| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1560 |
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| Symbol | |
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| ID | 3908759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1758035 |
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| End bp | 1759966 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883456 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_485181 |
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| Protein GI | 86748685 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.610668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACT ATGCCGGCCG CGTCGCGGCA GCCGATACGT TTCCGAAGCT GCTGCGGCTG
AATGCGCGAG AGTTCGGCGA ACAGATCGCC TTGCGCGAAA AATCGCTCGG ACTGTGGCGT
GTCTTCACCT GGGCCGACTA CCAGAGCCGG GTGCACGATT TCGCGCTCGG CATGATCGAG
CTCGGGCTCG GTCGCGGCGA CGTCATCGGC ATCATCGGCG ACAACCGGCC GGACTGGGTG
TCCGCCGAGA TCGCCACGCA CGCCATCGGC GCGATGAGCC TCGGGCTGTA TCGCGACGTG
CTCGACGAGG AAGCCGCCTA TCTCCTGACC TATGGCGAGG CCAAGCTGGT TTTCGCCGAG
GACGAGGAGC AGGTCGACAA GCTGCTGCTG CTCGCCGAGC GGGTGCCGAA CCTCAAGCAC
ATCGTCTATT CGGATCCGCG CGGGATGCGC AAATACGACG ACCCGCGGCT GCTGCCGGCC
GACACGCTGG CGGCGATGGG CCGCGCCCGC GCGGCGCGCG AGCCGGGGAT CTACGATCGC
CTGGTCGATG CGACGGGCGG CGAGGACGTC GCGATCCTCT GCACCACTTC GGGCACCACC
GCGCATCCCA AGCTGGCAAT GCTGGCCGCG GGGCGCGTGC TGAAACATTG CGCGACGTAT
CTCAGCTTCG ACCCGAAGGG GCCGGACGAC GAATACGTCT CGGTGCTGCC GCTGCCGTGG
ATCATGGAGC AGGTCTACGC GCTCGGCAAA GGGCTGTTGT GCCGGATGAA AGTCAATTTC
GTCGAAGAAC CCGACACCAT GATGAACGAC TTCCGCGAGA TCGCGCCGAC CTTCGTGCTG
TTCGCGCCGC GCGTCTGGGA AGGCATCGCC GCGGATGTGC GCGCGCGGGT GATGGACGCC
TCGCCACTGA AACAGCGGCT GTACGAGACC GGCATGAAAG CGGGGCTCGC GGCGCTCGCC
GAGGGCAAGC ATTCGGCCTT CGCCGACGCC GTGCTGTTCC GCGCGCTGCG CGACCGGCTC
GGCTTCACGC GGCTGCGCTC GGCGGCGACC GGCGGCGCGG CGCTCGGCCC GGATACTTTC
AAGTTCTTCC GCGCGATGGG CGTGCCGCTG CGCACGCTGT ACGGCCAGAC CGAACTGCTC
GGCGCCTACA CGCTGCACAG AGCGGACGCG GTCGATCCCG ACACCACCGG CGTGGCGATG
GGCGCCGAGA TCGAGATCAA GGTCGAGAAC CCCGATGTCC AGGGCATCGG CGAGATCGTG
GTGCGCCACC CCAACATGTA TCTCGGCTAC TACAAGAACG AGGAAGCATC CAAAGCCGAC
ATGCAGGACG GCTGGATGCA ATCCGGCGAC GCCGGCTATT TCAACGCGGC CGGCCAGCTC
GTGGTGATCG ACCGCATCAA GGATCTCGCC GAGACCTCGC ACGGCGAGAA ATTCTCGCCG
CAATATATCG AGAACAAGCT GAAATTCTCG CCCTATGTGG CCGAAGCCGT GGTGCTCGGC
GCCGGCCGCG ACCGGCTCGC GGCGATGATC TGCATCCGCT ATTCGATCAT CTCGAAATGG
GCCGAGAAGA AGCGGATCGG CTTCACCACC TATTCGGACC TCGCGTCGCG GCCCGAGGTC
TACGAGATGC TGCGCAGCGA GGTCGAATCG GTCAATGCGA CGCTGCCGCC GGCGCAGCGG
ATCGCCCGCT TCCTGCTGCT CTACAAGGAG CTCGACGCCG ACGACGGCGA ACTCACCCGC
ACCCGCAAGG TCCGCCGCTC GGTGATCAAT GAGAAATACG CCGACATCAT CGACGGCATC
TATGGCGGCC GGAGCGAGAT CCCGGTCGAC ACCCAGATCC AGTTTCAGGA CGGTACCACC
CAACGCATCC GAACGACGCT GAAGGTGGTC GACCTCGCCA GCGGCCACGC GCATGCGGAG
GCGGCGGAAT GA
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| Protein sequence | MMDYAGRVAA ADTFPKLLRL NAREFGEQIA LREKSLGLWR VFTWADYQSR VHDFALGMIE
LGLGRGDVIG IIGDNRPDWV SAEIATHAIG AMSLGLYRDV LDEEAAYLLT YGEAKLVFAE
DEEQVDKLLL LAERVPNLKH IVYSDPRGMR KYDDPRLLPA DTLAAMGRAR AAREPGIYDR
LVDATGGEDV AILCTTSGTT AHPKLAMLAA GRVLKHCATY LSFDPKGPDD EYVSVLPLPW
IMEQVYALGK GLLCRMKVNF VEEPDTMMND FREIAPTFVL FAPRVWEGIA ADVRARVMDA
SPLKQRLYET GMKAGLAALA EGKHSAFADA VLFRALRDRL GFTRLRSAAT GGAALGPDTF
KFFRAMGVPL RTLYGQTELL GAYTLHRADA VDPDTTGVAM GAEIEIKVEN PDVQGIGEIV
VRHPNMYLGY YKNEEASKAD MQDGWMQSGD AGYFNAAGQL VVIDRIKDLA ETSHGEKFSP
QYIENKLKFS PYVAEAVVLG AGRDRLAAMI CIRYSIISKW AEKKRIGFTT YSDLASRPEV
YEMLRSEVES VNATLPPAQR IARFLLLYKE LDADDGELTR TRKVRRSVIN EKYADIIDGI
YGGRSEIPVD TQIQFQDGTT QRIRTTLKVV DLASGHAHAE AAE
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