| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1539 |
|---|
| Symbol | |
|---|
| ID | 3908453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1733326 |
|---|
| End bp | 1734621 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883435 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_485160 |
|---|
| Protein GI | 86748664 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGC TCTCGGTGGT GCATCTGGCC CAGTCCGACA GCGAGGGCGG AGCGAACAAG
GCGGCCTATC GCATCCACAA GAATTTGCAG ACGCTCGGGC TTCGCTCGAC GTTCCATGTC
GGTCGCAAGC TTCGCGATGA TCCGTCGGTC GTGCCGGCGC ATTGGCCCGG TGTCGGCAGG
CTTGGCAGCG ACGTGGTCGC CTATCTCAAT GCGCGGACGC TGAGGAGCTA TCCGCACCGG
CTCGGAACGC CGTTTTCGCC GTCGTGCCTG CGCTATGGGC ACCTGGACCG TGGGCTGATC
GCCGGCGCCG ACGTCGTCTG CGCGCACTGG ATCGCCGGCG CCTTTCTGAA TTTCGGGCAG
TTGAAGGGCA TAGCAGCACC TTTGGTCTGG AGGCTTTCGG ACATCTGGCC GTTCAGCGGC
GGGTGCCATT ATCCCGGGGG CTGCTCCGGC TTCGAGCGGG CCTGTGGGGG CTGTCCGCAG
CTCGGCAGCA CCGAGGAGCA CGATCTGTCG CGGAGGGGCC TGCGGGCGCG GGAAGCCGCC
TATGGCGACC TCGATCTGAC CATCGTCGCC CCGAGCCGCT GGATCGCCGG TCTGGCGGGC
CGTTCCAGCC TGTTTGGCGG CCGGCGGATC GAACATATTC CGACCGGTGT CGATCTGCAG
GTGTTTCGGC CGCGCGACCG GCTGGCGGCG CGCCACACGA TCGGACTGCC GGAGAGCGGT
ACGATCGTCC TGTTCGGCGC TCTGAGCGCG ACGGACGATC CGCGCAAGGG CTATGCGCAT
CTGCTGCGGA CGATCGAGAA CCTCGCGGCT GCCGGCCGCA GGGATCTCTC GCTGGTCGTT
TTCGGCGGCG CCACCCAGGG GGCCGCCACC TCGATCGCCG GTTACCCCGT CCATCACCTC
GGCAGCATCG GCAGCGAGGA ACGGCTGGCG GAGATCTATT CCGCCGCGGA CGTGCTGATC
GCGCCGTTTC TGGAAGACAA CCTGCCGAAC GTGGTGCTGG AGGCGGTCGC CTGCGGGACG
CCGGTCGCCG CATTTGCCGC GGGCGGTATC CCGGATGCGA TCGACCATCA GGTGAACGGC
TATCTGGCAT CGACGGGCGA CGATGCGGAG CTCGCGCGGG GGGTGGCCAG CCTTCTCGAT
CGCCCCGATG CTGCACACGT GCGGAGCGCC GCACGCCGGC TTGCGGAGAC CCGATTCGAC
CTGCTGGACT GTGCGCGACG CTACATCGCC CTGTTCGAGG AACTCGCCGA GGCGTCTCGT
TCGCAAATTG ACAAGACCGC CGGGCGACGA CATTGA
|
|---|
| Protein sequence | MKPLSVVHLA QSDSEGGANK AAYRIHKNLQ TLGLRSTFHV GRKLRDDPSV VPAHWPGVGR
LGSDVVAYLN ARTLRSYPHR LGTPFSPSCL RYGHLDRGLI AGADVVCAHW IAGAFLNFGQ
LKGIAAPLVW RLSDIWPFSG GCHYPGGCSG FERACGGCPQ LGSTEEHDLS RRGLRAREAA
YGDLDLTIVA PSRWIAGLAG RSSLFGGRRI EHIPTGVDLQ VFRPRDRLAA RHTIGLPESG
TIVLFGALSA TDDPRKGYAH LLRTIENLAA AGRRDLSLVV FGGATQGAAT SIAGYPVHHL
GSIGSEERLA EIYSAADVLI APFLEDNLPN VVLEAVACGT PVAAFAAGGI PDAIDHQVNG
YLASTGDDAE LARGVASLLD RPDAAHVRSA ARRLAETRFD LLDCARRYIA LFEELAEASR
SQIDKTAGRR H
|
|---|
| |