Gene RPB_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1538 
Symbol 
ID3908452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1732591 
End bp1733307 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID637883434 
ProductGeneric methyltransferase 
Protein accessionYP_485159 
Protein GI86748663 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCA CGCCACGTCC GACTCCGCTG CAATGGGACA ACGAGACGTT GTCTCGTTTT 
TGGGGTTATC ATTCGCAGTT TCCCGAGAAC TACTTCAGCT ATCAAAAAGG TCGCGACGTC
GTCGGATATG TCAGCAGCGG ACTGCCGACA GGGGCGACCG TGCTCGACTA CGGCTGCGGT
CCGGGTCATC TGCTCCCGCA TTTGCTCGAT GCGGGATTCG TGGTGCAGGG CGCCGATATT
TCGCTCGAAA CGATGGGCTC GGCGGTCGAG CTGGGATCGC GGCAGAACTT CCTGGGCTTT
GCGACGATCG ATGATCTCGT CAAAGGAGCG CGCCGGTTCG ACGCCGTGTT CTTGCTCGAG
GTCGTCGAGC ATCTGGACGA CCGCTGGCTC GACCTGACGT TGAAGCAGGC GCGGGAGCTC
CTCAAAGAGA ACGGCCAGCT GATTGTGACG ACGCCGAACG AGGAAGTGCT CGAGGACAGT
GTGGTCTATT GCCCCGTGTC GAATGTCGTC TTTCACAGGT GGCAGCATGT GCGGAGTTGG
TCGTCGGCCT CGCTCAGCGA GTGCCTGTCG GCGCATGGTT TCCGCGAGGT GAAGACCGAG
GCCAGGACAT TTTCGCAGCC GCGGTCGCCG GACGTTTCGA TGCTGCGCTA CCGTGTCTCC
GGCCTGCTCA ACCGTTTTCG CAAGCCACAA TCGCTGATTT CCATCGCGCG CAAGTAG
 
Protein sequence
MPATPRPTPL QWDNETLSRF WGYHSQFPEN YFSYQKGRDV VGYVSSGLPT GATVLDYGCG 
PGHLLPHLLD AGFVVQGADI SLETMGSAVE LGSRQNFLGF ATIDDLVKGA RRFDAVFLLE
VVEHLDDRWL DLTLKQAREL LKENGQLIVT TPNEEVLEDS VVYCPVSNVV FHRWQHVRSW
SSASLSECLS AHGFREVKTE ARTFSQPRSP DVSMLRYRVS GLLNRFRKPQ SLISIARK