Gene RPB_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1534 
Symbol 
ID3908448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1727997 
End bp1728995 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID637883430 
ProductN-acetylneuraminate synthase 
Protein accessionYP_485155 
Protein GI86748659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03569] N-acetylneuraminate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAA CAAGTAATCC GTATATCATT GCGGAAATCG GTTCGGTTCA CGACGGGTCG 
TTCGGCAATG CCTGCCGTCT GCTCGAGACC GCCGCAGAAT GCGGGGCGGA TGCGGTCAAG
TTTCAGACCC ATATCGCAGA GGCGGAAACG CTGCCGAACG CGCCGTCGCC CTCCTACTTC
TCGGCAGAGC CGCGCACTGC CTATTTCAAG CGGACCGGGT TCTCGCCCGA GCAGTGGCGC
GCGCTCGCGG CGCTCGCGAA ATCAACGAAG GTCGACTTTT TGTCCTCGCC GTTCTCGCTC
GAAGCGGTGG ATCTGCTCGA AGACGTCGGT GTCGCCGCCT ACAAGATTCC CTCCGGCGAA
GTCAGCAATA TTCCCTTGCT CAGCCGCATC GCGCAGACCG GAAAGCCGGT CTTTCTGTCG
TCGGGCATGA GCAATTGGGA AGAGCTCGAT GCGGCGGTCG GCGCCCTGCG CGGATCGGCG
CTCACCTTGT TGCAATGCAC CTCCAAGTAT CCCTGTCCGC CGGAGCAGGT GGGACTGAAT
GCGATGTGCG TCATGAGAGA GCGCTATGGC ATCCCCGTCG GCTATTCGGA CCACACGCTC
GGATTTGCGG CGCCAATCGC CGCCGTCGCC CTCGGCGCCA CGGTGATCGA AAAGCACTTC
ACATTCTCCA AGCTGATGTA CGGCAGCGAT GCGAAGAACA GCATGGAGCC GGACGAGTTT
CGGCGGCTTT GCCGAGAGCT CAAGGAGACC GCCCGGATCA TCGCCAGCCC GGTCGACAAG
GACGATTTGT CGTCGCTGTC CGACATGAAG CTGATCTTCG AGAAGAGCAT CGTCTCGGCG
ACCGATCTGC CGGCCGCAAC CGAAATCGAG ATGCGTCATC TGGCTTTCAA GAAGCCGGGC
GACGGGATCT CTGCGGCAAA GTACAAGGAC GTGATCGGGC GACGCATCGT TCGGGCGTTG
CCGCGCGACC ACAAGTTCGC ATACGAGGAC TTCGAATGA
 
Protein sequence
MPATSNPYII AEIGSVHDGS FGNACRLLET AAECGADAVK FQTHIAEAET LPNAPSPSYF 
SAEPRTAYFK RTGFSPEQWR ALAALAKSTK VDFLSSPFSL EAVDLLEDVG VAAYKIPSGE
VSNIPLLSRI AQTGKPVFLS SGMSNWEELD AAVGALRGSA LTLLQCTSKY PCPPEQVGLN
AMCVMRERYG IPVGYSDHTL GFAAPIAAVA LGATVIEKHF TFSKLMYGSD AKNSMEPDEF
RRLCRELKET ARIIASPVDK DDLSSLSDMK LIFEKSIVSA TDLPAATEIE MRHLAFKKPG
DGISAAKYKD VIGRRIVRAL PRDHKFAYED FE