Gene RPB_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1518 
Symbol 
ID3908432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1712469 
End bp1712882 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID637883414 
Productmethionine sulfoxide reductase B 
Protein accessionYP_485139 
Protein GI86748643 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCAAGACGAT ACCCGGCAAG GTCGCCAAGA GCGAGGCCGA GTGGCGCAAG 
GAACTGACCC CGATGCAATA CGCCGTGCTG CGCGAGAAGG CGACTGAGCG CCCGTTCTCG
GGCGAATATG AGTACGAGAC CACGCCGGGC ACCTATGTCT GCGCCGGCTG CGGCCAGACC
CTGTTCGAGT CCGATGCGAA GTTCGATTCC GGTTGCGGCT GGCCGAGCTT CACCGCGCCG
GCGTCCGACG GCCACATCGA CGAAGAGCGC GACGTCAGCC ACGGCATGAT CCGGACCGAG
GTGCTGTGCG CGCGCTGCAA TGGGCATCTC GGCCACGTGT TTCCCGATGG TCCGGGGCCG
ACGGGACTGC GCTATTGCAT CAATTCGGCG GCGCTGAAGC TGAAGCCGCG GTAG
 
Protein sequence
MTDTKTIPGK VAKSEAEWRK ELTPMQYAVL REKATERPFS GEYEYETTPG TYVCAGCGQT 
LFESDAKFDS GCGWPSFTAP ASDGHIDEER DVSHGMIRTE VLCARCNGHL GHVFPDGPGP
TGLRYCINSA ALKLKPR