| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1517 |
|---|
| Symbol | |
|---|
| ID | 3908431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1711728 |
|---|
| End bp | 1712438 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637883413 |
|---|
| Product | methionine sulfoxide reductase A |
|---|
| Protein accession | YP_485138 |
|---|
| Protein GI | 86748642 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCA TCAGCCGTCT TGCTCGTAGC GCCGCCGCCC TGAGCGCGCT GGCCCTGTCC
GCGAGTTTCA CGCCCAGCCT TGCCGCCGAG GACGCGGTGG TGATCCCGCC GCCAGCGCTC
GACGTCAGTT CGGCGGACGG CACCCAGACC GCGGTGTTCG CGGGCGGCTG TTTCTGGGGC
GTGCAGGGCG TGTTCCAGCA CACGGCGGGC GTGCTCAACG CGGTGTCGGG CTATTCGGGC
GGCAGCCAGG CGACCGCGAA CTACACGGCG ATTTCGACCG GCGCCACCGG CCACGCCGAG
GCGGTGGAGA TCAAGTACAA TCCGAAACAG ATCAGCTACG GCCAGCTGCT GCAGATCTTC
TTCTCGGTGG TGCACGATCC GACCCAGCTC AACCGGCAGG GCCCCGACGT CGGTACGCAA
TATCGCTCGG CGATCTTCAC CGTGAACGAC GAGCAGAAGA AGGTCGCGGA CGCCTATATC
GCCCAGCTCG ACGCCGCGCG GGTCTACAAG AAGCCGATCG TCACCAAGGT CGGCCCGCTG
GACGGCTTCT ATGCCGCGGA GGCGTATCAT CAGGACTACC TGACGCTGCA CCCGACCCAG
CCCTATATCG TCTATAATGA TCTCCCGAAG ATCGAGAACC TGAAGAAGCT GTTCCCGAAG
GACTATCTCA CCAAGCCGAC GCTGGTGAGC AGCGCCAGGG CCACGAACTA G
|
|---|
| Protein sequence | MRFISRLARS AAALSALALS ASFTPSLAAE DAVVIPPPAL DVSSADGTQT AVFAGGCFWG
VQGVFQHTAG VLNAVSGYSG GSQATANYTA ISTGATGHAE AVEIKYNPKQ ISYGQLLQIF
FSVVHDPTQL NRQGPDVGTQ YRSAIFTVND EQKKVADAYI AQLDAARVYK KPIVTKVGPL
DGFYAAEAYH QDYLTLHPTQ PYIVYNDLPK IENLKKLFPK DYLTKPTLVS SARATN
|
|---|
| |