| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1512 |
|---|
| Symbol | |
|---|
| ID | 3908425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1704816 |
|---|
| End bp | 1705781 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883407 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_485133 |
|---|
| Protein GI | 86748637 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.379406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGTC GAGTCCAGGC TAAAGTCGTG ATCATCGGTT CCGGGCCGGC CGGTTACACC
GCCGCGATCT ATGCCGCGCG AGCCATGCTC GAGCCGATCC TGATCCAGGG CATCCAGCCC
GGCGGGCAGC TCACCATCAC CACCGATGTC GAGAACTATC CGGGCTTCGC CGACGTCATC
CAGGGCCCCT GGCTGATGGA GCAGATGGAG CGGCAGGCCC GGCACGTCGG AACCAAGATC
GTGACCGACC TCGTGGTCGA TCTCGACCTC AACCAGCGGC CGTTCCGGCT GACCTGCGAC
AGCGGCGACG TCTACATCGC CGAGACCGTG ATCCTGGCCA CCGGCGCGCA GGCGCGCTGG
CTCGGCATCC CGTCGGAGCA GACCTACAAG GGCTTCGGCG TCTCGGCCTG CGCGACCTGC
GACGGCTTCT TCTATCGCGG CAAGGACGTC GTCGTGGTCG GCGGCGGCAA CACCGCGGTC
GAGGAAGCGC TGTTCCTGAC CAACTTCGCC GCCAGCGTCA CCATCGTGCA TCGCCGCGAT
CATTTCCGCG CCGAGCGCAT CCTGCAGGAG CGCCTGTTCA AGCACCCGAA GATCAAGGTG
GTGTGGGACA GCGAGGTCGA CGAGATCTGC GGCAGCGACA GCCCGACCAA GGTCACGCAT
GTCCGGCTGA AGAACGTCAA GACCGGTGCG CTCAGCGAGG TTCGCGCCGA CGGCGTCTTC
ATCGCGATCG GTCACGCGCC GGCGACCGAA CTGGTCAAGG ACCAGCTCCG GCTGAAGCCG
TCGGGCTACG TCGAAGTCGC CCCGAACTCC ACCGCGACCT CGGTCCCCGG CGTGTTCGCC
GCGGGCGATG TCGCCGATGA AATCTATCGC CAGGCCGTCA CCGCCGCGGG CCTCGGCTGC
ATGGCCGCGC TGGAAGCCGA ACGCTTCCTC GCCCTGCGCG CCAGCGAACG CCAGGCGGCG
GAGTAG
|
|---|
| Protein sequence | MPSRVQAKVV IIGSGPAGYT AAIYAARAML EPILIQGIQP GGQLTITTDV ENYPGFADVI
QGPWLMEQME RQARHVGTKI VTDLVVDLDL NQRPFRLTCD SGDVYIAETV ILATGAQARW
LGIPSEQTYK GFGVSACATC DGFFYRGKDV VVVGGGNTAV EEALFLTNFA ASVTIVHRRD
HFRAERILQE RLFKHPKIKV VWDSEVDEIC GSDSPTKVTH VRLKNVKTGA LSEVRADGVF
IAIGHAPATE LVKDQLRLKP SGYVEVAPNS TATSVPGVFA AGDVADEIYR QAVTAAGLGC
MAALEAERFL ALRASERQAA E
|
|---|
| |