| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1505 |
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| Symbol | |
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| ID | 3908418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1700257 |
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| End bp | 1701117 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883400 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_485126 |
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| Protein GI | 86748630 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.412824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGA CCTATCCGAA GCCGCCCTAT CCGAAGCAGC AGCAATCGAT GCCGGGAACG
ACCGGCGAGA TGAACCCGCG CCCCGATCAC GGCGAGACGA CTTACAAGGG GGCCGGCCGG
TTGGAGGGCA TGAAAGCTCT CATCACCGGC GGCGACAGCG GCATCGGTCG CGCCGTGGCG
ATTGCCTATG CGCGAGAGGG GGCCGACATC CTGATTTCGT ATCTGAACGA AACGGAAGAC
GCAGCGGAGC TGAAAGCGCT GGTCGAGAAG GAGGGTCGCA AGGCCGTTCT GGTCGCCGGC
GATCTGCAGG ATCCGGCGCA TTGCCGGTCG GTCGTGACGC GCGCGGTCGA TGAACTCGGT
GGTGTCGACA TCCTGGTCAA CAATGCGGCT CACCAGGCGA CGTTCAAGGA CATCGGCGAC
ATCAGCGACG AGGAATGGGA GTTGACGTTC AAGGTCAACA TCCACGCGAT GTTCTATCTC
ACCAAGGCGG CGGTGCCGCA CATGAAGCCC GGTAGCGCCA TCGTCAATAC GGCATCCATC
AATTCGGATG CGCCGAACCC CTCGCTTCTC GCCTATGCGA CGACAAAAGG GGCGATCCAG
AACTTCACGG CCGGGCTGGC GCAGCTGCTC GCCGAGAAAG GCATCCGCGC GAATGCGGTC
GCGCCCGGGC CGATCTGGAC GCCGTTGATC CCCTCCACCA TGCCGGAAGA GGTCGTCGAG
AATTTCGGCA AGAACGTGCC GATGAAGCGC GCCGGCCAAC CGGCCGAACT GGCGACGGCC
TATGTCATGC TCGCCGATCC CCGCTCGAGC TACACATCCG GGACGACGGT CGCGGTGACG
GGCGGGAAAC CGTTCATCTG A
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| Protein sequence | MPSTYPKPPY PKQQQSMPGT TGEMNPRPDH GETTYKGAGR LEGMKALITG GDSGIGRAVA
IAYAREGADI LISYLNETED AAELKALVEK EGRKAVLVAG DLQDPAHCRS VVTRAVDELG
GVDILVNNAA HQATFKDIGD ISDEEWELTF KVNIHAMFYL TKAAVPHMKP GSAIVNTASI
NSDAPNPSLL AYATTKGAIQ NFTAGLAQLL AEKGIRANAV APGPIWTPLI PSTMPEEVVE
NFGKNVPMKR AGQPAELATA YVMLADPRSS YTSGTTVAVT GGKPFI
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